Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1605
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,884,392 | + | Shewana3_1604 | 0.80 | +0.6 | |
1,884,587 | + | +1.5 | |||
1,884,643 | + | +0.6 | |||
1,884,918 | + | -1.2 | |||
1,885,013 | - | Shewana3_1605 | 0.44 | -0.6 | |
1,885,051 | + | Shewana3_1605 | 0.66 | -1.6 | |
1,885,150 | + | -0.3 | |||
1,885,215 | - | +1.3 | |||
1,885,320 | - | Shewana3_1606 | 0.20 | +1.6 | |
1,885,386 | - | Shewana3_1606 | 0.32 | +2.9 | |
1,885,417 | - | Shewana3_1606 | 0.38 | +1.6 | |
1,885,417 | - | Shewana3_1606 | 0.38 | +1.0 | |
1,885,434 | - | Shewana3_1606 | 0.42 | +1.5 |
Or see this region's nucleotide sequence