Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1591
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,867,079 | + | Shewana3_1589 | 0.85 | +1.2 | |
1,867,079 | + | Shewana3_1589 | 0.85 | -0.3 | |
1,867,087 | - | Shewana3_1589 | 0.87 | +2.1 | |
1,867,337 | + | Shewana3_1590 | 0.39 | +0.7 | |
1,867,580 | - | -1.5 | |||
1,867,580 | - | +2.1 | |||
1,867,715 | + | +1.1 | |||
1,867,723 | - | +2.1 | |||
1,867,723 | - | +0.1 | |||
1,867,744 | + | -1.2 | |||
1,867,744 | + | -0.8 | |||
1,867,788 | - | +1.1 | |||
1,867,796 | - | -0.7 | |||
1,868,067 | - | Shewana3_1591 | 0.59 | -1.6 | |
1,868,426 | - | -1.0 | |||
1,868,626 | - | Shewana3_1592 | 0.15 | -0.2 | |
1,868,699 | - | Shewana3_1592 | 0.22 | +0.1 | |
1,868,833 | - | Shewana3_1592 | 0.35 | +0.8 | |
1,869,010 | + | Shewana3_1592 | 0.52 | +0.5 | |
1,869,218 | + | Shewana3_1592 | 0.71 | +0.8 |
Or see this region's nucleotide sequence