Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1513

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,760,835	+				+1.4
1,760,869	-				-1.5
1,761,000	+				-0.5
1,761,000	+				-1.3
1,761,008	-				+1.1
1,761,008	-				-0.3
1,761,023	+				+0.6
1,761,101	-		Shewana3_1512	0.22	-0.8
1,761,129	+		Shewana3_1512	0.28	-0.7
1,761,213	-		Shewana3_1512	0.47	-0.9
1,761,215	+		Shewana3_1512	0.48	-0.5
1,761,401	+		Shewana3_1512	0.90	+0.2
1,761,628	-				+0.6
1,761,672	-				+0.2
1,761,821	+				-0.8
1,761,829	-				+0.6
1,761,911	-		Shewana3_1513	0.13	-1.2
1,762,042	+		Shewana3_1513	0.20	+1.6
1,762,050	-		Shewana3_1513	0.20	-0.3
1,762,050	-		Shewana3_1513	0.20	+0.5
1,762,050	-		Shewana3_1513	0.20	-0.2
1,762,107	-		Shewana3_1513	0.23	-0.2
1,762,278	-		Shewana3_1513	0.32	-3.3
1,762,313	-		Shewana3_1513	0.34	+0.1
1,762,338	-		Shewana3_1513	0.35	+0.6
1,762,363	+		Shewana3_1513	0.36	-2.7
1,762,421	+		Shewana3_1513	0.39	-2.4
1,762,499	-		Shewana3_1513	0.43	-1.0
1,762,565	+		Shewana3_1513	0.46	-0.4
1,762,640	-		Shewana3_1513	0.50	-1.4
1,762,874	+		Shewana3_1513	0.62	+0.1
1,762,908	-		Shewana3_1513	0.64	+2.1
1,762,978	+		Shewana3_1513	0.68	+1.0
1,762,986	-		Shewana3_1513	0.68	-0.3
1,762,986	-		Shewana3_1513	0.68	+0.7
1,763,213	+		Shewana3_1513	0.80	+2.1
1,763,285	+		Shewana3_1513	0.83	-1.9
1,763,285	+		Shewana3_1513	0.83	-0.3
1,763,339	-		Shewana3_1513	0.86	-0.8
1,763,535	-				+0.7
1,763,761	+				-0.2
1,763,793	+				+0.1
1,763,861	-				+0.5
1,764,179	+		Shewana3_1514	0.29	-2.0
1,764,237	-		Shewana3_1514	0.34	-0.5
1,764,297	+		Shewana3_1514	0.40	-0.0
1,764,305	-		Shewana3_1514	0.41	-0.9
1,764,333	-		Shewana3_1514	0.43	+0.1