Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1357

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,569,001	+	flhA	Shewana3_1356	0.54	+1.3
1,569,099	+	flhA	Shewana3_1356	0.59	+0.5
1,569,213	+	flhA	Shewana3_1356	0.65	+1.2
1,569,221	+	flhA	Shewana3_1356	0.65	+1.4
1,569,269	+	flhA	Shewana3_1356	0.67	+0.4
1,569,277	-	flhA	Shewana3_1356	0.68	+1.8
1,569,277	-	flhA	Shewana3_1356	0.68	+0.2
1,569,277	-	flhA	Shewana3_1356	0.68	+0.8
1,569,345	-	flhA	Shewana3_1356	0.71	-1.5
1,570,008	+				+0.7
1,570,180	+	flhF	Shewana3_1357	0.15	+0.9
1,570,239	+	flhF	Shewana3_1357	0.20	+0.8
1,570,329	+	flhF	Shewana3_1357	0.26	+1.5
1,570,332	+	flhF	Shewana3_1357	0.26	+1.0
1,570,349	+	flhF	Shewana3_1357	0.28	+0.2
1,570,690	+	flhF	Shewana3_1357	0.52	+0.8
1,570,767	+	flhF	Shewana3_1357	0.58	+1.0
1,570,878	+	flhF	Shewana3_1357	0.66	+1.3
1,571,047	+	flhF	Shewana3_1357	0.78	+0.5
1,571,052	+	flhF	Shewana3_1357	0.79	+1.5
1,571,110	+	flhF	Shewana3_1357	0.83	+0.5
1,571,587	+		Shewana3_1358	0.27	+1.2
1,571,602	+		Shewana3_1358	0.29	+1.6
1,571,812	+		Shewana3_1358	0.52	+1.7
1,572,075	+		Shewana3_1358	0.82	+1.1
1,572,239	+				+1.4
1,572,288	-				+0.8