Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1340

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,552,190	+		Shewana3_1339	0.23	+0.5
1,552,407	-		Shewana3_1339	0.43	+0.8
1,552,412	-		Shewana3_1339	0.43	-2.1
1,552,432	+		Shewana3_1339	0.45	-0.1
1,552,562	+		Shewana3_1339	0.57	+0.3
1,552,698	+		Shewana3_1339	0.70	-0.2
1,552,728	-		Shewana3_1339	0.73	-1.8
1,552,732	+		Shewana3_1339	0.73	+0.0
1,552,872	+		Shewana3_1339	0.86	-0.0
1,552,872	+		Shewana3_1339	0.86	+0.7
1,552,880	-		Shewana3_1339	0.87	-0.9
1,552,880	-		Shewana3_1339	0.87	-1.5
1,552,880	-		Shewana3_1339	0.87	-0.5
1,552,880	-		Shewana3_1339	0.87	-0.8
1,552,894	+		Shewana3_1339	0.88	-0.0
1,552,949	+				-0.6
1,552,957	-				-1.0
1,553,021	-				-1.4
1,553,100	-				+0.8
1,553,105	+				-0.5
1,553,261	-		Shewana3_1340	0.18	-2.0
1,553,272	+		Shewana3_1340	0.19	+0.9
1,553,375	-		Shewana3_1340	0.27	-0.4
1,553,435	+		Shewana3_1340	0.31	-0.2
1,553,506	+		Shewana3_1340	0.36	+1.4
1,553,514	-		Shewana3_1340	0.37	-1.0
1,553,560	+		Shewana3_1340	0.40	+1.0
1,553,713	+		Shewana3_1340	0.52	+1.0
1,553,727	+		Shewana3_1340	0.53	+1.4
1,553,823	-		Shewana3_1340	0.60	+0.4
1,554,068	+		Shewana3_1340	0.78	+0.1
1,554,171	+		Shewana3_1340	0.86	+0.4
1,554,171	+		Shewana3_1340	0.86	-0.0
1,554,212	-		Shewana3_1340	0.89	-0.8
1,554,302	+				+0.2
1,554,302	+				-0.6
1,554,308	+				-0.2
1,554,310	-				-0.5
1,554,417	+				-0.5
1,554,417	+				+0.1
1,554,417	+				-0.0
1,554,661	-		Shewana3_1341	0.38	-1.0
1,554,810	+		Shewana3_1341	0.82	+0.1
1,554,818	-		Shewana3_1341	0.84	+1.8
1,554,856	-				-1.2
1,554,866	+				-0.9
1,554,953	+				+1.2
1,555,245	+	fliF	Shewana3_1342	0.20	+2.2
1,555,295	+	fliF	Shewana3_1342	0.22	-0.9