Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1329

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,540,135	-	flgI	Shewana3_1328	0.17	+0.8
1,540,320	+	flgI	Shewana3_1328	0.34	+0.6
1,540,394	+	flgI	Shewana3_1328	0.40	+0.3
1,540,401	-	flgI	Shewana3_1328	0.41	-2.1
1,540,403	+	flgI	Shewana3_1328	0.41	+0.4
1,540,411	-	flgI	Shewana3_1328	0.42	+0.8
1,540,574	+	flgI	Shewana3_1328	0.57	+0.6
1,540,617	-	flgI	Shewana3_1328	0.61	+0.2
1,540,642	+	flgI	Shewana3_1328	0.63	+0.8
1,540,843	+	flgI	Shewana3_1328	0.82	+1.5
1,540,869	+	flgI	Shewana3_1328	0.84	-0.3
1,541,157	-				-0.5
1,541,362	-	flgJ	Shewana3_1329	0.26	-2.2
1,541,373	-	flgJ	Shewana3_1329	0.27	-0.7
1,541,798	+	flgJ	Shewana3_1329	0.63	-1.5
1,541,900	-	flgJ	Shewana3_1329	0.72	-0.2
1,541,972	+	flgJ	Shewana3_1329	0.78	+1.0
1,542,067	-	flgJ	Shewana3_1329	0.86	+0.6
1,542,251	+				+0.7
1,542,259	-				+1.8
1,542,274	-				+0.8
1,542,285	+				+0.1
1,542,307	+				+0.5
1,542,380	+				-0.5
1,542,392	-				+0.8
1,542,444	+				+1.4
1,542,619	+		Shewana3_1330	0.18	+0.9
1,542,665	+		Shewana3_1330	0.20	-0.7
1,542,670	+		Shewana3_1330	0.21	+0.8
1,542,756	+		Shewana3_1330	0.25	+0.3
1,542,830	+		Shewana3_1330	0.29	-1.2
1,543,156	+		Shewana3_1330	0.46	+1.5
1,543,156	+		Shewana3_1330	0.46	+0.0
1,543,213	+		Shewana3_1330	0.49	+0.9