Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1277

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,487,187	+		Shewana3_1275	0.33	+0.8
1,487,188	-		Shewana3_1275	0.33	-0.5
1,487,293	-		Shewana3_1275	0.49	-2.6
1,487,463	-		Shewana3_1275	0.74	-0.6
1,487,626	-				+1.2
1,487,760	+				+0.8
1,487,805	-		Shewana3_1276	0.19	-0.8
1,487,877	+		Shewana3_1276	0.37	+0.1
1,487,915	+		Shewana3_1276	0.46	-0.1
1,487,915	+		Shewana3_1276	0.46	-0.9
1,488,010	-		Shewana3_1276	0.70	-0.6
1,488,280	+		Shewana3_1277	0.12	+0.2
1,488,330	-		Shewana3_1277	0.16	+0.1
1,488,330	-		Shewana3_1277	0.16	-2.6
1,488,330	-		Shewana3_1277	0.16	-0.3
1,488,416	+		Shewana3_1277	0.23	+0.6
1,488,441	+		Shewana3_1277	0.25	+0.2
1,488,558	-		Shewana3_1277	0.35	-0.4
1,488,558	-		Shewana3_1277	0.35	-0.7
1,488,588	-		Shewana3_1277	0.37	+1.0
1,488,588	-		Shewana3_1277	0.37	-0.3
1,488,649	+		Shewana3_1277	0.42	+1.3
1,488,668	-		Shewana3_1277	0.44	-1.5
1,488,690	+		Shewana3_1277	0.46	+0.6
1,488,868	-		Shewana3_1277	0.60	-1.0
1,488,961	-		Shewana3_1277	0.68	-1.3
1,489,053	+		Shewana3_1277	0.75	-0.8
1,489,105	-		Shewana3_1277	0.80	+0.2
1,489,166	+		Shewana3_1277	0.85	-0.3
1,489,176	+		Shewana3_1277	0.85	-2.4
1,489,270	+				-0.1
1,489,272	+				-0.2
1,489,280	-				-1.0
1,489,280	-				+0.8
1,489,738	+		Shewana3_1278	0.10	-0.6
1,489,816	-		Shewana3_1278	0.18	+0.1
1,489,831	-		Shewana3_1278	0.20	-0.7
1,490,038	+		Shewana3_1278	0.42	-0.1
1,490,038	+		Shewana3_1278	0.42	+0.1
1,490,038	+		Shewana3_1278	0.42	+1.1
1,490,046	-		Shewana3_1278	0.43	-1.0
1,490,055	-		Shewana3_1278	0.44	-1.2
1,490,198	+		Shewana3_1278	0.59	-0.3
1,490,245	-		Shewana3_1278	0.64	-1.2
1,490,275	-		Shewana3_1278	0.67	-0.4