Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1234
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,438,686 | + | -0.9 | |||
| 1,438,686 | + | -2.0 | |||
| 1,438,742 | - | +0.0 | |||
| 1,438,847 | + | xseA | Shewana3_1234 | 0.16 | -1.4 |
| 1,438,900 | - | xseA | Shewana3_1234 | 0.19 | -0.2 |
| 1,439,085 | + | xseA | Shewana3_1234 | 0.33 | -2.4 |
| 1,439,307 | + | xseA | Shewana3_1234 | 0.50 | -2.9 |
| 1,439,336 | - | xseA | Shewana3_1234 | 0.52 | +0.2 |
| 1,439,664 | + | xseA | Shewana3_1234 | 0.76 | -0.3 |
| 1,439,767 | + | xseA | Shewana3_1234 | 0.84 | +0.8 |
| 1,439,767 | + | xseA | Shewana3_1234 | 0.84 | +1.8 |
| 1,439,852 | + | -0.7 | |||
| 1,439,860 | - | -2.4 | |||
| 1,440,208 | + | -1.4 |
Or see this region's nucleotide sequence