Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1147
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,352,869 | + | Shewana3_1145 | 0.22 | -1.0 | |
1,352,941 | + | Shewana3_1145 | 0.39 | -0.7 | |
1,352,983 | + | Shewana3_1145 | 0.48 | -3.1 | |
1,353,509 | + | Shewana3_1146 | 0.41 | -0.8 | |
1,353,581 | - | Shewana3_1146 | 0.57 | +0.5 | |
1,353,797 | - | -1.4 | |||
1,353,841 | + | +0.8 | |||
1,353,892 | + | +0.8 | |||
1,353,897 | + | +1.8 | |||
1,354,022 | - | Shewana3_1147 | 0.44 | +1.1 | |
1,354,165 | - | Shewana3_1147 | 0.85 | +1.0 | |
1,354,229 | + | +1.8 | |||
1,354,410 | - | Shewana3_1148 | 0.12 | +0.8 | |
1,354,570 | + | Shewana3_1148 | 0.21 | +0.8 | |
1,354,578 | - | Shewana3_1148 | 0.22 | +1.1 | |
1,354,880 | - | Shewana3_1148 | 0.40 | +1.0 | |
1,354,972 | + | Shewana3_1148 | 0.45 | -0.7 |
Or see this region's nucleotide sequence