Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1055

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,235,313	+				+0.5
1,235,443	-				-0.1
1,235,475	-				+0.1
1,235,557	+	torD	Shewana3_1054	0.11	+0.3
1,235,669	-	torD	Shewana3_1054	0.29	+0.4
1,235,729	-	torD	Shewana3_1054	0.39	-0.4
1,235,958	+	torD	Shewana3_1054	0.75	+0.2
1,236,139	+				+0.8
1,236,150	+				-1.4
1,236,213	+				+0.5
1,236,263	+				-0.4
1,236,271	-				+2.4
1,236,271	-				-0.5
1,236,271	-				+0.0
1,236,319	-				-0.1
1,236,501	-		Shewana3_1055	0.13	+0.1
1,236,729	-		Shewana3_1055	0.22	-0.1
1,236,833	-		Shewana3_1055	0.26	-1.2
1,237,385	-		Shewana3_1055	0.48	-0.3
1,237,417	+		Shewana3_1055	0.50	-0.1
1,237,593	-		Shewana3_1055	0.57	+0.4
1,237,673	-		Shewana3_1055	0.60	-0.5
1,237,917	+		Shewana3_1055	0.70	+0.0
1,238,024	+		Shewana3_1055	0.74	+0.2
1,238,024	+		Shewana3_1055	0.74	-0.7
1,238,066	+		Shewana3_1055	0.76	-2.6
1,238,105	+		Shewana3_1055	0.77	-0.9
1,238,113	-		Shewana3_1055	0.78	-0.2
1,238,130	+		Shewana3_1055	0.78	+1.0
1,238,185	+		Shewana3_1055	0.80	-1.3
1,238,193	-		Shewana3_1055	0.81	-0.3
1,238,215	-		Shewana3_1055	0.82	-0.7
1,238,312	+		Shewana3_1055	0.86	-0.5
1,238,403	-		Shewana3_1055	0.89	-2.3
1,238,474	+				-0.1
1,238,489	-				+0.6
1,238,489	-				-0.4
1,238,526	+				-1.0
1,238,574	+				-2.2
1,238,856	-		Shewana3_1056	0.14	+0.1
1,238,856	-		Shewana3_1056	0.14	-0.1
1,238,890	-		Shewana3_1056	0.17	+0.1
1,239,242	+		Shewana3_1056	0.47	-0.0