Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1042

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,218,029	-				+0.9
1,218,045	+				-0.9
1,218,452	-		Shewana3_1041	0.60	+1.9
1,218,672	+		Shewana3_1041	0.88	+0.4
1,218,672	+		Shewana3_1041	0.88	-0.1
1,218,692	+				+1.2
1,218,717	+				+0.6
1,218,998	-				-0.1
1,219,033	-				+0.9
1,219,070	+				+1.4
1,219,078	-				+0.9
1,219,116	+	deoA	Shewana3_1042	0.13	+1.5
1,219,199	+	deoA	Shewana3_1042	0.19	-1.2
1,219,235	-	deoA	Shewana3_1042	0.22	+1.9
1,219,599	-	deoA	Shewana3_1042	0.49	-0.9
1,219,661	-	deoA	Shewana3_1042	0.54	-0.9
1,219,677	+	deoA	Shewana3_1042	0.55	+0.9
1,219,753	-	deoA	Shewana3_1042	0.61	-0.7
1,219,757	+	deoA	Shewana3_1042	0.61	+0.0
1,219,824	+	deoA	Shewana3_1042	0.66	+1.6
1,220,002	+	deoA	Shewana3_1042	0.79	+1.2
1,220,019	-	deoA	Shewana3_1042	0.81	-0.6
1,220,091	-	deoA	Shewana3_1042	0.86	-2.0
1,220,099	+	deoA	Shewana3_1042	0.87	+0.4
1,220,159	+				+1.1
1,220,243	+				+0.5
1,220,306	-				+0.0
1,220,458	+		Shewana3_1043	0.14	-0.5
1,220,471	-		Shewana3_1043	0.15	-1.2
1,220,632	+		Shewana3_1043	0.28	+0.7
1,220,760	+		Shewana3_1043	0.39	+1.0
1,220,763	+		Shewana3_1043	0.39	+0.6
1,220,892	+		Shewana3_1043	0.50	+0.8