Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0962

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,128,379	-		Shewana3_0961	0.58	-1.8
1,128,486	-		Shewana3_0961	0.68	-1.0
1,128,496	+		Shewana3_0961	0.69	+0.9
1,128,504	-		Shewana3_0961	0.70	-0.6
1,128,588	+		Shewana3_0961	0.78	+1.9
1,128,594	+		Shewana3_0961	0.78	+0.9
1,128,633	+		Shewana3_0961	0.82	-1.8
1,128,660	+		Shewana3_0961	0.84	-1.0
1,128,660	+		Shewana3_0961	0.84	-1.6
1,128,668	-		Shewana3_0961	0.85	-1.6
1,128,682	+		Shewana3_0961	0.86	-1.8
1,128,689	+		Shewana3_0961	0.87	-0.4
1,128,697	-		Shewana3_0961	0.88	-1.3
1,128,697	-		Shewana3_0961	0.88	-1.2
1,128,697	-		Shewana3_0961	0.88	-0.2
1,128,700	-		Shewana3_0961	0.88	-2.0
1,128,700	-		Shewana3_0961	0.88	-0.6
1,128,700	-		Shewana3_0961	0.88	+0.6
1,128,701	-		Shewana3_0961	0.88	-1.1
1,128,704	+		Shewana3_0961	0.88	-1.5
1,128,704	+		Shewana3_0961	0.88	-0.2
1,128,704	+		Shewana3_0961	0.88	-0.5
1,128,712	-		Shewana3_0961	0.89	+2.6
1,128,712	-		Shewana3_0961	0.89	-1.1
1,128,873	-				-2.3
1,128,917	+				+0.2
1,128,925	-				-1.3
1,128,925	-				+0.9
1,128,980	+				+0.7
1,128,981	-				-0.0
1,128,998	+				+0.8
1,128,999	+				+0.7
1,128,999	+				+0.0
1,128,999	+				+0.6
1,128,999	+				+0.1
1,128,999	+				+0.2
1,129,005	+				+0.1
1,129,006	-				+0.1
1,129,007	-				+0.4
1,129,031	-				-0.0
1,129,125	+				-1.8
1,129,174	-				-0.7
1,129,297	-				+0.7
1,129,376	-				-0.9
1,129,383	-				-2.0
1,129,401	-				-1.2
1,129,413	-				+1.0
1,129,464	+				-0.9
1,129,516	-		Shewana3_0962	0.12	-0.6
1,129,783	-		Shewana3_0962	0.32	-0.4
1,129,793	-		Shewana3_0962	0.32	-0.9
1,129,877	+		Shewana3_0962	0.39	+0.3
1,129,885	-		Shewana3_0962	0.39	+0.9
1,130,050	-		Shewana3_0962	0.52	-2.0
1,130,235	-		Shewana3_0962	0.66	-2.0
1,130,375	+		Shewana3_0962	0.76	-0.2
1,130,394	-		Shewana3_0962	0.78	-0.4
1,130,506	-		Shewana3_0962	0.86	-1.1
1,130,521	-		Shewana3_0962	0.87	-1.3
1,130,649	+				-0.2
1,130,657	-				+0.2
1,130,664	+				+0.1
1,130,734	+				-0.2
1,130,792	+				+0.1
1,130,792	+				+0.5
1,130,800	-				-1.2
1,130,836	-				-0.0
1,131,185	+		Shewana3_0963	0.61	+0.8
1,131,205	-		Shewana3_0963	0.64	-2.0
1,131,213	+		Shewana3_0963	0.65	-0.4
1,131,379	+				-0.3