Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0915

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
1,068,835	+				-0.8
1,068,835	+				+0.5
1,068,835	+				-1.3
1,068,835	+				-1.9
1,068,842	-				-0.6
1,068,842	-				-0.0
1,068,843	-				+1.9
1,068,843	-				+0.0
1,068,843	-				+0.6
1,068,843	-				+0.1
1,068,843	-				-0.5
1,069,057	-				+0.0
1,069,057	-				+0.4
1,069,072	-				-0.7
1,069,109	+				+0.4
1,069,116	+				-1.4
1,069,240	+				+0.2
1,069,241	+				+0.2
1,069,241	+				-0.9
1,069,249	-				-0.2
1,069,259	+				-0.7
1,069,259	+				+0.6
1,069,267	-				+0.3
1,069,275	+				+0.7
1,069,283	-				-1.3
1,069,283	-				+0.8
1,069,359	+				+0.3
1,069,362	-				-0.5
1,069,388	-				+0.1
1,069,421	-				-0.4
1,069,448	+				-0.9
1,069,448	+				-0.9
1,069,450	-				+0.6
1,069,450	-				-1.1
1,069,456	-				-0.2
1,069,456	-				-0.5
1,069,467	+				-0.8
1,069,486	+				-0.9
1,069,495	+				-0.4
1,069,495	+				+0.3
1,069,501	-				-0.7
1,069,505	+				-2.0
1,069,505	+				-2.4
1,069,505	+				-1.7
1,069,505	+				-1.3
1,069,513	-				-1.6
1,069,513	-				-0.9
1,069,513	-				-1.9
1,069,513	-				-0.1
1,069,513	-				-1.2
1,069,538	+				-0.1
1,069,540	-				+0.3
1,069,546	-				-0.1
1,069,559	-				-0.7
1,069,607	+				+1.3
1,069,607	+				+0.9
1,069,607	+				+0.3
1,069,607	+				-1.2
1,069,607	+				-0.1
1,069,607	+				-0.4
1,069,607	+				+1.9
1,069,607	+				+1.9
1,069,615	-				-0.3
1,069,615	-				-1.4
1,069,615	-				+0.3
1,069,615	-				-0.9
1,069,615	-				-0.7
1,069,615	-				-0.7
1,069,615	-				-0.7
1,069,615	-				-1.9
1,069,615	-				+0.7
1,069,726	+				-2.1
1,069,770	+				-1.1
1,069,817	-				+1.9
1,069,828	-				-0.1
1,069,844	+				-0.7
1,069,886	+				-0.6
1,069,933	+				-0.5
1,069,942	+				+0.2
1,069,950	-		Shewana3_0915	0.10	+0.3
1,069,961	+		Shewana3_0915	0.11	+0.4
1,069,975	+		Shewana3_0915	0.12	-0.2
1,069,983	-		Shewana3_0915	0.12	-0.7
1,070,041	+		Shewana3_0915	0.16	-0.9
1,070,044	-		Shewana3_0915	0.17	-0.1
1,070,140	-		Shewana3_0915	0.23	+0.3
1,070,141	-		Shewana3_0915	0.23	-0.0
1,070,168	-		Shewana3_0915	0.25	-1.3
1,070,194	-		Shewana3_0915	0.27	-0.9
1,070,275	+		Shewana3_0915	0.32	-1.9
1,070,436	-		Shewana3_0915	0.43	-0.3
1,070,621	+		Shewana3_0915	0.56	-0.1
1,070,675	-		Shewana3_0915	0.60	-2.0
1,070,689	-		Shewana3_0915	0.61	+0.1
1,070,731	+		Shewana3_0915	0.64	-1.2
1,070,977	-		Shewana3_0915	0.81	+0.3
1,070,989	-		Shewana3_0915	0.81	-2.8
1,071,168	+				+1.5
1,071,171	+				+0.4
1,071,173	+				+0.2
1,071,173	+				+0.2
1,071,181	-				-0.6
1,071,313	-				-0.4
1,071,313	-				-0.1
1,071,314	+				+0.3
1,071,466	-				-0.3
1,071,503	+		Shewana3_0916	0.11	-0.4
1,071,504	+		Shewana3_0916	0.11	+0.1
1,071,629	-		Shewana3_0916	0.29	-0.4
1,071,645	-		Shewana3_0916	0.31	+0.1
1,071,702	+		Shewana3_0916	0.39	-0.2
1,071,720	-		Shewana3_0916	0.42	-0.5
1,071,733	+		Shewana3_0916	0.44	+1.1
1,071,756	-		Shewana3_0916	0.47	-0.6
1,071,835	+		Shewana3_0916	0.58	-0.2
1,072,145	-				-1.3