Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0776
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 897,701 | + | +0.9 | |||
| 897,834 | + | -0.6 | |||
| 897,842 | - | +0.5 | |||
| 897,991 | - | Shewana3_0776 | 0.11 | -0.6 | |
| 898,059 | + | Shewana3_0776 | 0.19 | -2.2 | |
| 898,185 | + | Shewana3_0776 | 0.33 | -1.0 | |
| 898,317 | + | Shewana3_0776 | 0.49 | +0.1 | |
| 898,317 | + | Shewana3_0776 | 0.49 | -0.0 | |
| 898,338 | + | Shewana3_0776 | 0.51 | -0.8 | |
| 898,394 | - | Shewana3_0776 | 0.57 | -0.7 | |
| 898,475 | + | Shewana3_0776 | 0.67 | -0.8 | |
| 898,476 | + | Shewana3_0776 | 0.67 | -0.9 | |
| 898,476 | + | Shewana3_0776 | 0.67 | -0.7 | |
| 898,507 | + | Shewana3_0776 | 0.70 | +0.1 | |
| 898,552 | - | Shewana3_0776 | 0.75 | -0.8 | |
| 898,629 | - | Shewana3_0776 | 0.84 | -1.2 | |
| 898,666 | + | Shewana3_0776 | 0.89 | -1.8 | |
| 899,147 | - | Shewana3_0777 | 0.13 | -0.5 | |
| 899,509 | - | Shewana3_0777 | 0.36 | -0.0 |
Or see this region's nucleotide sequence