Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4364
Experiment: Chloramphenicol 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.0001 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 251,802 | - | Shewana3_4363 | 0.85 | -0.2 | |
| 252,015 | - | -0.5 | |||
| 252,022 | - | +0.5 | |||
| 252,022 | - | -1.4 | |||
| 252,022 | - | +1.0 | |||
| 252,480 | - | +0.4 | |||
| 252,545 | + | Shewana3_4364 | 0.16 | +1.5 | |
| 252,604 | - | Shewana3_4364 | 0.26 | +0.8 | |
| 252,704 | - | Shewana3_4364 | 0.42 | +1.0 | |
| 253,035 | - | +0.5 | |||
| 253,077 | - | +0.2 | |||
| 253,395 | - | Shewana3_4365 | 0.11 | +0.2 | |
| 253,733 | - | Shewana3_4365 | 0.35 | -0.3 | |
| 253,777 | - | Shewana3_4365 | 0.39 | +0.1 | |
| 253,887 | + | Shewana3_4365 | 0.47 | -0.4 | |
| 253,892 | + | Shewana3_4365 | 0.47 | +0.0 | |
| 253,895 | - | Shewana3_4365 | 0.47 | -0.0 | |
| 253,895 | - | Shewana3_4365 | 0.47 | +0.2 | |
| 254,045 | - | Shewana3_4365 | 0.58 | +0.1 |
Or see this region's nucleotide sequence