Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4280

Experiment: Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.0001 mg/ml
160,919	-		Shewana3_4279	0.15	+0.5
160,926	-		Shewana3_4279	0.16	-0.3
161,111	+		Shewana3_4279	0.57	+0.4
161,235	-		Shewana3_4279	0.85	-1.4
161,254	-		Shewana3_4279	0.89	+0.9
161,298	+				-0.5
161,306	-				-0.7
161,306	-				+0.3
161,312	+				+0.1
161,312	-				-0.1
161,320	-				-1.5
161,320	-				+0.5
161,544	+				+0.2
161,544	+				+0.1
161,768	-				+0.0
161,774	-				-1.1
161,908	+				+0.1
161,933	-		Shewana3_4280	0.11	-2.0
161,964	-		Shewana3_4280	0.12	-1.0
162,001	-		Shewana3_4280	0.14	-0.1
162,031	+		Shewana3_4280	0.15	+0.2
162,169	-		Shewana3_4280	0.21	+1.5
162,263	-		Shewana3_4280	0.25	-0.3
162,359	-		Shewana3_4280	0.29	-2.5
162,374	+		Shewana3_4280	0.29	-0.3
162,385	+		Shewana3_4280	0.30	+0.0
162,385	+		Shewana3_4280	0.30	-1.1
162,393	-		Shewana3_4280	0.30	-2.2
162,393	-		Shewana3_4280	0.30	-0.7
162,393	-		Shewana3_4280	0.30	-1.2
162,393	-		Shewana3_4280	0.30	-2.8
162,525	-		Shewana3_4280	0.36	-0.5
162,552	+		Shewana3_4280	0.37	+0.5
162,566	+		Shewana3_4280	0.37	-0.2
162,574	-		Shewana3_4280	0.38	+0.3
162,667	-		Shewana3_4280	0.41	-2.8
162,717	+		Shewana3_4280	0.44	-1.2
162,751	+		Shewana3_4280	0.45	-0.4
162,756	+		Shewana3_4280	0.45	+0.5
162,790	-		Shewana3_4280	0.47	-1.0
162,792	+		Shewana3_4280	0.47	+0.2
162,870	+		Shewana3_4280	0.50	+0.2
162,892	+		Shewana3_4280	0.51	+0.3
162,926	-		Shewana3_4280	0.52	-0.2
162,997	+		Shewana3_4280	0.55	-0.0
163,005	+		Shewana3_4280	0.56	-0.4
163,005	+		Shewana3_4280	0.56	-0.0
163,005	+		Shewana3_4280	0.56	+0.4
163,013	-		Shewana3_4280	0.56	-1.1
163,013	-		Shewana3_4280	0.56	+0.6
163,013	-		Shewana3_4280	0.56	-1.2
163,013	-		Shewana3_4280	0.56	-0.1
163,013	-		Shewana3_4280	0.56	-1.7
163,013	-		Shewana3_4280	0.56	-0.2
163,013	-		Shewana3_4280	0.56	+0.2
163,024	+		Shewana3_4280	0.56	+0.3
163,029	+		Shewana3_4280	0.57	-0.7
163,037	-		Shewana3_4280	0.57	-0.8
163,152	-		Shewana3_4280	0.62	-1.4
163,201	-		Shewana3_4280	0.64	-1.2
163,304	+		Shewana3_4280	0.68	+0.2
163,467	+		Shewana3_4280	0.75	+0.2
163,532	+		Shewana3_4280	0.78	-0.0
163,532	+		Shewana3_4280	0.78	+0.1
163,540	-		Shewana3_4280	0.78	+0.1
163,540	-		Shewana3_4280	0.78	+1.0
163,556	+		Shewana3_4280	0.79	-0.4
163,557	+		Shewana3_4280	0.79	-0.0
163,565	-		Shewana3_4280	0.79	-0.0
163,640	+		Shewana3_4280	0.82	-1.1
163,662	+		Shewana3_4280	0.83	-0.4
163,667	+		Shewana3_4280	0.83	-1.4
163,825	-				-0.4
163,825	-				+0.2
163,825	-				-0.7
163,897	+				-0.1
164,004	-				+0.3
164,111	-				-1.9
164,111	-				-2.0
164,205	+				-0.8
164,213	-				-0.5
164,213	-				+0.2
164,268	+				+0.0
164,274	+				-1.2
164,571	-		Shewana3_4281	0.21	+0.4
164,705	-		Shewana3_4281	0.26	-0.5
164,792	-		Shewana3_4281	0.30	-0.5