Experiment: acetate 80 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_438 and Pf6N2E2_439 are separated by 301 nucleotides Pf6N2E2_439 and Pf6N2E2_440 are separated by 30 nucleotides Pf6N2E2_440 and Pf6N2E2_441 are separated by 203 nucleotides Pf6N2E2_441 and Pf6N2E2_442 are separated by 109 nucleotides Pf6N2E2_442 and Pf6N2E2_443 are separated by 0 nucleotides
Pf6N2E2_438 - hypothetical protein, at 503,841 to 504,569
_438
Pf6N2E2_439 - FIG00958580: hypothetical protein, at 504,871 to 505,041
_439
Pf6N2E2_440 - FIG00954920: hypothetical protein, at 505,072 to 505,374
_440
Pf6N2E2_441 - FIG00958773: hypothetical protein, at 505,578 to 505,928
_441
Pf6N2E2_442 - FIG00962345: hypothetical protein, at 506,038 to 506,268
_442
Pf6N2E2_443 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 506,269 to 506,550
_443
Position (kb) 505
506 Strain fitness (log2 ratio) -1
0
1 at 504.122 kb on - strand, within Pf6N2E2_438 at 504.145 kb on + strand, within Pf6N2E2_438 at 504.146 kb on - strand, within Pf6N2E2_438 at 504.146 kb on - strand, within Pf6N2E2_438 at 504.161 kb on - strand, within Pf6N2E2_438 at 504.299 kb on - strand, within Pf6N2E2_438 at 504.355 kb on + strand, within Pf6N2E2_438 at 504.528 kb on + strand at 504.528 kb on + strand at 504.529 kb on - strand at 504.529 kb on - strand at 504.856 kb on + strand at 504.857 kb on - strand at 505.010 kb on + strand, within Pf6N2E2_439 at 505.010 kb on + strand, within Pf6N2E2_439 at 505.010 kb on + strand, within Pf6N2E2_439 at 505.010 kb on + strand, within Pf6N2E2_439 at 505.011 kb on - strand, within Pf6N2E2_439 at 505.011 kb on - strand, within Pf6N2E2_439 at 505.022 kb on + strand, within Pf6N2E2_439 at 505.022 kb on + strand, within Pf6N2E2_439 at 505.023 kb on - strand, within Pf6N2E2_439 at 505.023 kb on - strand, within Pf6N2E2_439 at 505.023 kb on - strand, within Pf6N2E2_439 at 505.023 kb on - strand, within Pf6N2E2_439 at 505.242 kb on - strand, within Pf6N2E2_440 at 505.242 kb on - strand, within Pf6N2E2_440 at 505.242 kb on - strand, within Pf6N2E2_440 at 505.242 kb on - strand, within Pf6N2E2_440 at 505.269 kb on + strand, within Pf6N2E2_440 at 505.440 kb on + strand at 505.441 kb on - strand at 505.457 kb on - strand at 505.457 kb on - strand at 505.457 kb on - strand at 505.459 kb on + strand at 505.491 kb on - strand at 505.491 kb on - strand at 505.511 kb on + strand at 505.512 kb on - strand at 505.577 kb on + strand at 505.577 kb on + strand at 505.577 kb on + strand at 505.577 kb on + strand at 505.577 kb on + strand at 505.692 kb on + strand, within Pf6N2E2_441 at 505.693 kb on - strand, within Pf6N2E2_441 at 505.971 kb on + strand at 505.971 kb on + strand at 505.972 kb on - strand at 505.972 kb on - strand at 506.024 kb on + strand at 506.024 kb on + strand at 506.024 kb on + strand at 506.024 kb on + strand at 506.025 kb on - strand at 506.025 kb on - strand at 506.079 kb on + strand, within Pf6N2E2_442 at 506.079 kb on + strand, within Pf6N2E2_442 at 506.079 kb on + strand, within Pf6N2E2_442 at 506.079 kb on + strand, within Pf6N2E2_442 at 506.079 kb on + strand, within Pf6N2E2_442 at 506.080 kb on - strand, within Pf6N2E2_442 at 506.080 kb on - strand, within Pf6N2E2_442 at 506.223 kb on + strand, within Pf6N2E2_442 at 506.270 kb on + strand at 506.270 kb on + strand at 506.270 kb on + strand at 506.271 kb on - strand at 506.271 kb on - strand at 506.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate 80 mM remove 504,122 - Pf6N2E2_438 0.39 -1.2 504,145 + Pf6N2E2_438 0.42 -0.1 504,146 - Pf6N2E2_438 0.42 -0.3 504,146 - Pf6N2E2_438 0.42 -0.2 504,161 - Pf6N2E2_438 0.44 +0.1 504,299 - Pf6N2E2_438 0.63 +1.5 504,355 + Pf6N2E2_438 0.71 +0.5 504,528 + -0.9 504,528 + +0.3 504,529 - -0.3 504,529 - +0.2 504,856 + -0.1 504,857 - -0.7 505,010 + Pf6N2E2_439 0.81 -1.5 505,010 + Pf6N2E2_439 0.81 +0.2 505,010 + Pf6N2E2_439 0.81 -0.3 505,010 + Pf6N2E2_439 0.81 -0.0 505,011 - Pf6N2E2_439 0.82 +0.3 505,011 - Pf6N2E2_439 0.82 +0.8 505,022 + Pf6N2E2_439 0.88 +0.1 505,022 + Pf6N2E2_439 0.88 -0.2 505,023 - Pf6N2E2_439 0.89 -0.3 505,023 - Pf6N2E2_439 0.89 -0.0 505,023 - Pf6N2E2_439 0.89 +0.8 505,023 - Pf6N2E2_439 0.89 -0.3 505,242 - Pf6N2E2_440 0.56 -0.2 505,242 - Pf6N2E2_440 0.56 -1.2 505,242 - Pf6N2E2_440 0.56 -0.3 505,242 - Pf6N2E2_440 0.56 -0.6 505,269 + Pf6N2E2_440 0.65 +0.8 505,440 + +0.3 505,441 - -0.7 505,457 - +1.0 505,457 - -0.6 505,457 - +0.1 505,459 + -0.1 505,491 - -0.4 505,491 - -0.9 505,511 + +0.1 505,512 - +0.3 505,577 + +0.2 505,577 + -0.1 505,577 + +0.6 505,577 + -0.1 505,577 + +0.1 505,692 + Pf6N2E2_441 0.32 +0.6 505,693 - Pf6N2E2_441 0.33 -0.1 505,971 + +0.1 505,971 + +0.2 505,972 - -1.0 505,972 - -0.7 506,024 + +0.4 506,024 + +0.2 506,024 + +0.5 506,024 + -0.9 506,025 - +0.0 506,025 - -0.1 506,079 + Pf6N2E2_442 0.18 -0.9 506,079 + Pf6N2E2_442 0.18 +0.4 506,079 + Pf6N2E2_442 0.18 +0.5 506,079 + Pf6N2E2_442 0.18 +0.7 506,079 + Pf6N2E2_442 0.18 +0.6 506,080 - Pf6N2E2_442 0.18 -0.8 506,080 - Pf6N2E2_442 0.18 +0.1 506,223 + Pf6N2E2_442 0.80 -1.4 506,270 + +0.0 506,270 + +0.5 506,270 + +0.5 506,271 - -0.0 506,271 - +0.2 506,271 - -0.2
Or see this region's nucleotide sequence