Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06463 and H281DRAFT_06464 are separated by 101 nucleotides
H281DRAFT_06463: H281DRAFT_06463 - transposase, IS4 family, at 70,913 to 72,034
_06463
H281DRAFT_06464: H281DRAFT_06464 - hypothetical protein, at 72,136 to 72,228
_06464
Position (kb) 72
73 Strain fitness (log2 ratio) -1
0
1
2
3 at 71.326 kb on - strand, within H281DRAFT_06463 at 71.338 kb on - strand, within H281DRAFT_06463 at 71.400 kb on - strand, within H281DRAFT_06463 at 71.481 kb on + strand at 71.482 kb on - strand, within H281DRAFT_06463 at 71.482 kb on - strand, within H281DRAFT_06463 at 71.786 kb on + strand, within H281DRAFT_06463 at 71.787 kb on - strand, within H281DRAFT_06463 at 71.880 kb on + strand, within H281DRAFT_06463 at 71.881 kb on - strand, within H281DRAFT_06463 at 71.881 kb on - strand, within H281DRAFT_06463 at 72.066 kb on + strand at 72.144 kb on + strand at 72.145 kb on - strand at 72.145 kb on - strand at 72.145 kb on - strand at 72.152 kb on + strand, within H281DRAFT_06464 at 72.152 kb on + strand, within H281DRAFT_06464 at 72.153 kb on - strand, within H281DRAFT_06464 at 72.153 kb on - strand, within H281DRAFT_06464 at 72.190 kb on + strand, within H281DRAFT_06464 at 72.190 kb on + strand, within H281DRAFT_06464 at 72.190 kb on + strand, within H281DRAFT_06464 at 72.190 kb on + strand, within H281DRAFT_06464 at 72.190 kb on + strand, within H281DRAFT_06464 at 72.190 kb on + strand, within H281DRAFT_06464 at 72.190 kb on + strand, within H281DRAFT_06464 at 72.191 kb on - strand, within H281DRAFT_06464 at 72.191 kb on - strand, within H281DRAFT_06464 at 72.191 kb on - strand, within H281DRAFT_06464
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 71,326 - H281DRAFT_06463 0.37 +0.2 71,338 - H281DRAFT_06463 0.38 +0.7 71,400 - H281DRAFT_06463 0.43 -0.2 71,481 + +3.2 71,482 - H281DRAFT_06463 0.51 -1.0 71,482 - H281DRAFT_06463 0.51 -0.6 71,786 + H281DRAFT_06463 0.78 +0.1 71,787 - H281DRAFT_06463 0.78 +0.4 71,880 + H281DRAFT_06463 0.86 -0.7 71,881 - H281DRAFT_06463 0.86 -0.8 71,881 - H281DRAFT_06463 0.86 +0.0 72,066 + -1.5 72,144 + -1.4 72,145 - -0.1 72,145 - -0.1 72,145 - +0.9 72,152 + H281DRAFT_06464 0.17 +0.2 72,152 + H281DRAFT_06464 0.17 +1.2 72,153 - H281DRAFT_06464 0.18 +0.3 72,153 - H281DRAFT_06464 0.18 +0.1 72,190 + H281DRAFT_06464 0.58 -0.1 72,190 + H281DRAFT_06464 0.58 +0.5 72,190 + H281DRAFT_06464 0.58 +0.8 72,190 + H281DRAFT_06464 0.58 +0.3 72,190 + H281DRAFT_06464 0.58 +0.1 72,190 + H281DRAFT_06464 0.58 +0.5 72,190 + H281DRAFT_06464 0.58 +0.1 72,191 - H281DRAFT_06464 0.59 -1.6 72,191 - H281DRAFT_06464 0.59 +0.4 72,191 - H281DRAFT_06464 0.59 +1.1
Or see this region's nucleotide sequence