Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06444 and H281DRAFT_06445 are separated by 42 nucleotides H281DRAFT_06445 and H281DRAFT_06446 are separated by 19 nucleotides H281DRAFT_06446 and H281DRAFT_06447 are separated by 742 nucleotides
H281DRAFT_06444: H281DRAFT_06444 - cyclic pyranopterin monophosphate synthase subunit MoaA, at 50,014 to 51,117
_06444
H281DRAFT_06445: H281DRAFT_06445 - Molybdopterin synthase catalytic subunit, at 51,160 to 51,717
_06445
H281DRAFT_06446: H281DRAFT_06446 - molybdopterin synthase subunit MoaD (EC 2.8.1.12), at 51,737 to 51,994
_06446
H281DRAFT_06447: H281DRAFT_06447 - protein PsiE, at 52,737 to 53,195
_06447
Position (kb) 51
52 Strain fitness (log2 ratio) -2
-1
0
1 at 50.915 kb on + strand, within H281DRAFT_06444 at 50.915 kb on + strand, within H281DRAFT_06444 at 50.915 kb on + strand, within H281DRAFT_06444 at 50.915 kb on + strand, within H281DRAFT_06444 at 50.915 kb on + strand, within H281DRAFT_06444 at 50.915 kb on + strand, within H281DRAFT_06444 at 50.915 kb on + strand at 50.916 kb on - strand, within H281DRAFT_06444 at 50.916 kb on - strand, within H281DRAFT_06444 at 50.916 kb on - strand, within H281DRAFT_06444 at 50.916 kb on - strand, within H281DRAFT_06444 at 50.916 kb on - strand, within H281DRAFT_06444 at 50.917 kb on + strand, within H281DRAFT_06444 at 50.917 kb on + strand, within H281DRAFT_06444 at 50.917 kb on + strand, within H281DRAFT_06444 at 50.917 kb on + strand, within H281DRAFT_06444 at 50.917 kb on + strand, within H281DRAFT_06444 at 50.917 kb on + strand, within H281DRAFT_06444 at 50.918 kb on - strand, within H281DRAFT_06444 at 50.918 kb on - strand, within H281DRAFT_06444 at 50.919 kb on + strand, within H281DRAFT_06444 at 50.919 kb on + strand, within H281DRAFT_06444 at 50.920 kb on - strand, within H281DRAFT_06444 at 50.920 kb on - strand, within H281DRAFT_06444 at 50.920 kb on - strand, within H281DRAFT_06444 at 51.006 kb on + strand, within H281DRAFT_06444 at 51.083 kb on - strand at 51.087 kb on + strand at 51.087 kb on + strand at 51.087 kb on + strand at 51.088 kb on - strand at 51.088 kb on - strand at 51.133 kb on + strand at 51.134 kb on - strand at 51.134 kb on - strand at 51.458 kb on + strand, within H281DRAFT_06445 at 51.755 kb on + strand at 51.999 kb on + strand at 51.999 kb on + strand at 51.999 kb on + strand at 51.999 kb on + strand at 52.000 kb on - strand at 52.039 kb on + strand at 52.201 kb on - strand at 52.242 kb on - strand at 52.288 kb on - strand at 52.391 kb on + strand at 52.391 kb on + strand at 52.398 kb on + strand at 52.398 kb on + strand at 52.398 kb on + strand at 52.399 kb on - strand at 52.399 kb on - strand at 52.399 kb on - strand at 52.558 kb on + strand at 52.558 kb on + strand at 52.567 kb on + strand at 52.567 kb on + strand at 52.738 kb on + strand at 52.738 kb on + strand at 52.738 kb on + strand at 52.739 kb on - strand at 52.816 kb on - strand, within H281DRAFT_06447 at 52.816 kb on - strand, within H281DRAFT_06447 at 52.845 kb on + strand, within H281DRAFT_06447 at 52.846 kb on - strand, within H281DRAFT_06447 at 52.846 kb on - strand, within H281DRAFT_06447 at 52.859 kb on + strand, within H281DRAFT_06447 at 52.860 kb on - strand, within H281DRAFT_06447 at 52.863 kb on - strand, within H281DRAFT_06447 at 52.868 kb on + strand, within H281DRAFT_06447 at 52.931 kb on + strand, within H281DRAFT_06447 at 52.968 kb on + strand, within H281DRAFT_06447 at 52.973 kb on - strand, within H281DRAFT_06447
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x remove 50,915 + H281DRAFT_06444 0.82 -1.1 50,915 + H281DRAFT_06444 0.82 -1.5 50,915 + H281DRAFT_06444 0.82 -0.3 50,915 + H281DRAFT_06444 0.82 -0.4 50,915 + H281DRAFT_06444 0.82 +0.7 50,915 + H281DRAFT_06444 0.82 -0.6 50,915 + +0.9 50,916 - H281DRAFT_06444 0.82 +0.4 50,916 - H281DRAFT_06444 0.82 -0.6 50,916 - H281DRAFT_06444 0.82 +0.4 50,916 - H281DRAFT_06444 0.82 -1.1 50,916 - H281DRAFT_06444 0.82 -0.2 50,917 + H281DRAFT_06444 0.82 +0.3 50,917 + H281DRAFT_06444 0.82 +0.6 50,917 + H281DRAFT_06444 0.82 -1.5 50,917 + H281DRAFT_06444 0.82 +0.3 50,917 + H281DRAFT_06444 0.82 -0.4 50,917 + H281DRAFT_06444 0.82 +0.0 50,918 - H281DRAFT_06444 0.82 +0.9 50,918 - H281DRAFT_06444 0.82 +1.7 50,919 + H281DRAFT_06444 0.82 +0.2 50,919 + H281DRAFT_06444 0.82 -0.4 50,920 - H281DRAFT_06444 0.82 +0.3 50,920 - H281DRAFT_06444 0.82 +0.2 50,920 - H281DRAFT_06444 0.82 +0.1 51,006 + H281DRAFT_06444 0.90 -0.1 51,083 - -0.2 51,087 + +0.2 51,087 + +0.6 51,087 + -0.1 51,088 - -0.1 51,088 - -0.7 51,133 + -0.8 51,134 - -0.1 51,134 - -1.2 51,458 + H281DRAFT_06445 0.53 +0.7 51,755 + -1.2 51,999 + -0.4 51,999 + +0.5 51,999 + +0.7 51,999 + -0.2 52,000 - +0.9 52,039 + +0.2 52,201 - -2.1 52,242 - +0.5 52,288 - +0.9 52,391 + -0.0 52,391 + -1.1 52,398 + +0.4 52,398 + -1.1 52,398 + +1.1 52,399 - -0.6 52,399 - -0.2 52,399 - +0.4 52,558 + +0.3 52,558 + -0.1 52,567 + +0.6 52,567 + +0.5 52,738 + -1.2 52,738 + +0.4 52,738 + -2.6 52,739 - -0.4 52,816 - H281DRAFT_06447 0.17 -0.6 52,816 - H281DRAFT_06447 0.17 +0.0 52,845 + H281DRAFT_06447 0.24 +0.8 52,846 - H281DRAFT_06447 0.24 +1.0 52,846 - H281DRAFT_06447 0.24 +0.6 52,859 + H281DRAFT_06447 0.27 -0.2 52,860 - H281DRAFT_06447 0.27 -0.6 52,863 - H281DRAFT_06447 0.27 -0.8 52,868 + H281DRAFT_06447 0.29 -0.1 52,931 + H281DRAFT_06447 0.42 +1.2 52,968 + H281DRAFT_06447 0.50 +0.0 52,973 - H281DRAFT_06447 0.51 +0.9
Or see this region's nucleotide sequence