Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3959

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
4,073,285	+		Ga0059261_3958	0.49	+0.5
4,073,285	+		Ga0059261_3958	0.49	-0.3
4,073,285	+		Ga0059261_3958	0.49	-0.7
4,073,285	+		Ga0059261_3958	0.49	-0.4
4,073,285	+		Ga0059261_3958	0.49	-0.3
4,073,286	-		Ga0059261_3958	0.49	+0.1
4,073,286	-		Ga0059261_3958	0.49	-0.5
4,073,286	-		Ga0059261_3958	0.49	+0.3
4,073,286	-		Ga0059261_3958	0.49	+0.3
4,073,286	-		Ga0059261_3958	0.49	-0.7
4,073,399	-		Ga0059261_3958	0.62	-1.4
4,073,512	-		Ga0059261_3958	0.75	-0.4
4,073,750	+				-0.0
4,073,750	+				-1.0
4,073,751	-				+0.1
4,073,751	-				+0.3
4,073,751	-				-0.5
4,073,751	-				-0.4
4,073,751	-				-0.4
4,073,824	+				+0.6
4,073,824	+				+0.1
4,073,824	+				-0.4
4,073,824	+				+0.2
4,073,824	+				-0.2
4,073,825	-				-0.7
4,073,825	-				+0.1
4,073,931	+				+0.3
4,073,934	+				+0.3
4,073,934	+				+0.1
4,073,935	-				-0.2
4,074,122	+		Ga0059261_3959	0.40	-0.0
4,074,122	+		Ga0059261_3959	0.40	-0.9
4,074,123	-		Ga0059261_3959	0.41	+0.2
4,074,123	-		Ga0059261_3959	0.41	-0.1
4,074,312	+				+0.4
4,074,312	+				+0.0
4,074,313	-				-0.4
4,074,313	-				+1.0
4,074,343	+				+0.8
4,074,343	+				-0.2
4,074,343	+				+0.2
4,074,343	+				+0.8
4,074,344	-				+0.4
4,074,344	-				+1.0
4,074,344	-				+0.7
4,074,344	-				+0.1
4,074,344	-				-0.0
4,074,344	-				+0.1
4,074,379	-				-0.3
4,074,425	-				+0.4
4,074,425	-				-0.1
4,074,425	-				-0.3
4,074,537	+				+1.0
4,074,537	+				-0.0
4,074,538	-				+0.2
4,074,538	-				-0.2
4,074,538	-				-0.4
4,074,538	-				-0.4
4,074,551	-				+0.6
4,074,567	+				+0.3
4,074,605	+				+0.0
4,074,605	+				-0.4
4,074,605	+				-0.2
4,074,605	+				-0.1
4,074,605	+				-1.0
4,074,605	+				-1.1
4,074,605	+				+0.8
4,074,605	+				+1.0
4,074,605	+				-0.5
4,074,606	-				-0.6
4,074,606	-				+0.2
4,074,606	-				-0.4
4,074,606	-				+0.5
4,074,606	-				+0.4
4,074,606	-				+0.1
4,074,606	-				+1.0
4,074,606	-				-0.4
4,074,606	-				+0.5
4,074,606	-				-0.1
4,074,606	-				-0.0
4,074,606	-				+1.2
4,074,708	+				+0.2
4,074,709	-				+0.4
4,074,770	+				-0.2
4,074,770	+				-0.6
4,074,770	+				+0.3
4,074,770	+				-0.6
4,074,771	-				-0.1
4,074,772	+				-0.2
4,074,773	-				-1.4
4,074,782	+				+0.0
4,074,782	+				+0.1
4,074,782	+				-0.2
4,074,783	-				-0.2
4,074,783	-				-0.3
4,074,783	-				+1.2
4,074,810	+				+0.5
4,074,811	-				-1.0
4,074,811	-				+0.4
4,074,811	-				-1.1
4,074,857	+				+0.8
4,074,857	+				+0.5
4,074,857	+				+0.4
4,074,857	+				+0.0
4,074,858	-				+0.3
4,074,858	-				-0.2
4,074,858	-				+0.7
4,074,858	-				+0.8
4,074,858	-				+0.1
4,074,858	-				-0.5
4,074,858	-				+1.4
4,074,901	+				-0.2
4,074,902	-				+0.4
4,074,910	+				-0.5
4,074,910	+				+0.2
4,074,910	+				-0.2
4,074,910	+				+0.0
4,075,028	+		Ga0059261_3960	0.25	-0.0
4,075,028	+		Ga0059261_3960	0.25	+0.5
4,075,028	+		Ga0059261_3960	0.25	-0.8
4,075,028	+		Ga0059261_3960	0.25	-0.3
4,075,028	+				+0.2
4,075,028	+		Ga0059261_3960	0.25	-0.1
4,075,029	-		Ga0059261_3960	0.25	+0.1
4,075,029	-		Ga0059261_3960	0.25	-0.7
4,075,029	-		Ga0059261_3960	0.25	+0.5
4,075,029	-		Ga0059261_3960	0.25	-0.5
4,075,032	-		Ga0059261_3960	0.25	+0.6
4,075,052	+		Ga0059261_3960	0.28	+0.8
4,075,052	+		Ga0059261_3960	0.28	-0.3
4,075,052	+		Ga0059261_3960	0.28	-0.9
4,075,052	+				+1.7
4,075,053	-		Ga0059261_3960	0.28	-0.1
4,075,053	-		Ga0059261_3960	0.28	+0.2
4,075,069	+		Ga0059261_3960	0.30	-0.5
4,075,069	+		Ga0059261_3960	0.30	-0.1
4,075,069	+		Ga0059261_3960	0.30	-1.0
4,075,069	+		Ga0059261_3960	0.30	-0.6
4,075,069	+		Ga0059261_3960	0.30	+1.8
4,075,070	-		Ga0059261_3960	0.30	-0.6
4,075,070	-		Ga0059261_3960	0.30	-0.3
4,075,070	-		Ga0059261_3960	0.30	+0.1
4,075,070	-		Ga0059261_3960	0.30	-0.1
4,075,070	-		Ga0059261_3960	0.30	-0.2
4,075,127	+		Ga0059261_3960	0.38	-0.8
4,075,127	+		Ga0059261_3960	0.38	+0.4
4,075,127	+		Ga0059261_3960	0.38	+0.6
4,075,127	+		Ga0059261_3960	0.38	+0.1
4,075,127	+		Ga0059261_3960	0.38	+0.5
4,075,127	+		Ga0059261_3960	0.38	+0.2
4,075,127	+		Ga0059261_3960	0.38	-0.1
4,075,127	+		Ga0059261_3960	0.38	-0.2
4,075,128	-		Ga0059261_3960	0.38	-0.1
4,075,128	-		Ga0059261_3960	0.38	-0.2
4,075,128	-		Ga0059261_3960	0.38	+0.6
4,075,128	-		Ga0059261_3960	0.38	+0.6
4,075,128	-				-0.6
4,075,128	-		Ga0059261_3960	0.38	+0.2
4,075,128	-		Ga0059261_3960	0.38	-0.6
4,075,128	-		Ga0059261_3960	0.38	+0.7
4,075,128	-		Ga0059261_3960	0.38	-0.9
4,075,128	-		Ga0059261_3960	0.38	+0.4
4,075,145	+		Ga0059261_3960	0.40	+0.9
4,075,145	+		Ga0059261_3960	0.40	+0.3
4,075,145	+		Ga0059261_3960	0.40	-0.5
4,075,145	+		Ga0059261_3960	0.40	-0.2
4,075,146	-		Ga0059261_3960	0.41	+0.5
4,075,146	-		Ga0059261_3960	0.41	-0.3
4,075,146	-		Ga0059261_3960	0.41	-0.7
4,075,146	-		Ga0059261_3960	0.41	-1.2
4,075,146	-		Ga0059261_3960	0.41	-0.1
4,075,150	+		Ga0059261_3960	0.41	-0.3
4,075,150	+		Ga0059261_3960	0.41	-0.4
4,075,198	+		Ga0059261_3960	0.48	-0.3
4,075,199	-		Ga0059261_3960	0.48	+0.9
4,075,246	+		Ga0059261_3960	0.54	-0.6
4,075,247	-		Ga0059261_3960	0.54	+0.7
4,075,277	+		Ga0059261_3960	0.58	-0.6
4,075,277	+		Ga0059261_3960	0.58	+0.1
4,075,277	+		Ga0059261_3960	0.58	+0.8
4,075,277	+		Ga0059261_3960	0.58	+0.8
4,075,277	+		Ga0059261_3960	0.58	+0.7
4,075,277	+		Ga0059261_3960	0.58	+0.4
4,075,277	+		Ga0059261_3960	0.58	+0.6
4,075,278	-		Ga0059261_3960	0.58	-0.3
4,075,278	-		Ga0059261_3960	0.58	-0.4
4,075,278	-		Ga0059261_3960	0.58	-1.2
4,075,278	-		Ga0059261_3960	0.58	+0.1
4,075,278	-		Ga0059261_3960	0.58	-0.2
4,075,278	-		Ga0059261_3960	0.58	-0.4
4,075,278	-		Ga0059261_3960	0.58	+0.3
4,075,278	-		Ga0059261_3960	0.58	-0.2
4,075,279	+		Ga0059261_3960	0.59	+0.2
4,075,279	+		Ga0059261_3960	0.59	-1.9
4,075,279	+		Ga0059261_3960	0.59	+0.6
4,075,279	+		Ga0059261_3960	0.59	+0.2
4,075,279	+		Ga0059261_3960	0.59	+0.5
4,075,279	+		Ga0059261_3960	0.59	+1.0
4,075,279	+		Ga0059261_3960	0.59	-0.5
4,075,279	+		Ga0059261_3960	0.59	+0.1
4,075,279	+		Ga0059261_3960	0.59	+0.1
4,075,279	+		Ga0059261_3960	0.59	+0.3
4,075,279	+		Ga0059261_3960	0.59	-0.1
4,075,279	+		Ga0059261_3960	0.59	-0.4
4,075,279	+		Ga0059261_3960	0.59	+0.2
4,075,279	+		Ga0059261_3960	0.59	-0.1
4,075,279	+		Ga0059261_3960	0.59	+0.8
4,075,280	-		Ga0059261_3960	0.59	-0.2
4,075,280	-		Ga0059261_3960	0.59	+0.5
4,075,280	-		Ga0059261_3960	0.59	-0.3
4,075,280	-		Ga0059261_3960	0.59	+1.6
4,075,280	-				-0.9
4,075,280	-		Ga0059261_3960	0.59	-0.0
4,075,280	-		Ga0059261_3960	0.59	+0.3
4,075,280	-		Ga0059261_3960	0.59	+0.2
4,075,329	+		Ga0059261_3960	0.65	-0.9
4,075,331	+		Ga0059261_3960	0.66	+0.3
4,075,331	+		Ga0059261_3960	0.66	+0.4
4,075,331	+		Ga0059261_3960	0.66	+0.2
4,075,331	+		Ga0059261_3960	0.66	+0.0
4,075,331	+		Ga0059261_3960	0.66	-0.2
4,075,331	+		Ga0059261_3960	0.66	-0.7
4,075,331	+		Ga0059261_3960	0.66	-0.3
4,075,331	+		Ga0059261_3960	0.66	-0.3
4,075,332	-		Ga0059261_3960	0.66	+1.2
4,075,332	-		Ga0059261_3960	0.66	+0.3
4,075,332	-		Ga0059261_3960	0.66	-0.5
4,075,332	-		Ga0059261_3960	0.66	-0.3
4,075,332	-		Ga0059261_3960	0.66	-0.2
4,075,332	-		Ga0059261_3960	0.66	+0.4
4,075,332	-		Ga0059261_3960	0.66	-0.0
4,075,332	-		Ga0059261_3960	0.66	-0.1
4,075,332	-		Ga0059261_3960	0.66	-0.1
4,075,332	-		Ga0059261_3960	0.66	-0.5
4,075,332	-		Ga0059261_3960	0.66	+2.3
4,075,332	-		Ga0059261_3960	0.66	+0.3