Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3309

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,432,383	+		Ga0059261_3306	0.57	+0.5
3,432,383	+		Ga0059261_3306	0.57	+0.1
3,432,384	-		Ga0059261_3306	0.57	+0.5
3,432,384	-		Ga0059261_3306	0.57	-0.7
3,432,384	-		Ga0059261_3306	0.57	-0.1
3,432,386	+		Ga0059261_3306	0.58	-0.9
3,432,386	+		Ga0059261_3306	0.58	+0.3
3,432,386	+		Ga0059261_3306	0.58	+0.7
3,432,386	+		Ga0059261_3306	0.58	-0.3
3,432,386	+		Ga0059261_3306	0.58	+0.0
3,432,386	+		Ga0059261_3306	0.58	-0.3
3,432,386	+		Ga0059261_3306	0.58	-0.7
3,432,386	+		Ga0059261_3306	0.58	+0.5
3,432,387	-		Ga0059261_3306	0.58	-0.7
3,432,387	-		Ga0059261_3306	0.58	-0.6
3,432,387	-		Ga0059261_3306	0.58	-1.3
3,432,387	-		Ga0059261_3306	0.58	-0.4
3,432,387	-		Ga0059261_3306	0.58	+2.9
3,432,387	-		Ga0059261_3306	0.58	+0.0
3,432,431	+		Ga0059261_3306	0.80	+0.0
3,432,431	+		Ga0059261_3306	0.80	-1.2
3,432,431	+		Ga0059261_3306	0.80	-0.0
3,432,431	+				+2.0
3,432,431	+		Ga0059261_3306	0.80	+1.2
3,432,431	+		Ga0059261_3306	0.80	-0.4
3,432,431	+		Ga0059261_3306	0.80	-0.5
3,432,431	+		Ga0059261_3306	0.80	-0.3
3,432,431	+		Ga0059261_3306	0.80	+0.5
3,432,432	-		Ga0059261_3306	0.80	-0.7
3,432,432	-		Ga0059261_3306	0.80	-1.4
3,432,432	-		Ga0059261_3306	0.80	+0.6
3,432,432	-		Ga0059261_3306	0.80	-0.3
3,432,432	-		Ga0059261_3306	0.80	+0.8
3,432,432	-		Ga0059261_3306	0.80	+0.4
3,432,432	-		Ga0059261_3306	0.80	+0.1
3,432,432	-		Ga0059261_3306	0.80	-1.6
3,432,432	-		Ga0059261_3306	0.80	-1.4
3,432,432	-		Ga0059261_3306	0.80	+0.8
3,432,432	-		Ga0059261_3306	0.80	-2.0
3,432,432	-		Ga0059261_3306	0.80	-0.3
3,432,449	+		Ga0059261_3306	0.88	-0.1
3,432,509	+				-0.5
3,432,509	+				-0.4
3,432,510	-		Ga0059261_3307	0.10	-0.1
3,432,510	-		Ga0059261_3307	0.10	+0.2
3,432,544	+		Ga0059261_3307	0.18	-0.1
3,432,544	+		Ga0059261_3307	0.18	-0.1
3,432,544	+		Ga0059261_3307	0.18	+0.5
3,432,544	+		Ga0059261_3307	0.18	-0.8
3,432,544	+		Ga0059261_3307	0.18	-0.1
3,432,544	+		Ga0059261_3307	0.18	-0.4
3,432,544	+		Ga0059261_3307	0.18	-1.2
3,432,544	+		Ga0059261_3307	0.18	-0.2
3,432,544	+		Ga0059261_3307	0.18	+0.3
3,432,544	+		Ga0059261_3307	0.18	+1.8
3,432,544	+		Ga0059261_3307	0.18	-0.3
3,432,544	+		Ga0059261_3307	0.18	+0.4
3,432,544	+		Ga0059261_3307	0.18	-1.0
3,432,545	-		Ga0059261_3307	0.19	+0.5
3,432,545	-		Ga0059261_3307	0.19	+0.4
3,432,545	-		Ga0059261_3307	0.19	-0.3
3,432,545	-		Ga0059261_3307	0.19	+0.1
3,432,545	-		Ga0059261_3307	0.19	-0.7
3,432,545	-		Ga0059261_3307	0.19	-0.4
3,432,547	-		Ga0059261_3307	0.19	+0.4
3,432,547	-		Ga0059261_3307	0.19	+1.4
3,432,656	-		Ga0059261_3307	0.46	+0.1
3,432,706	+		Ga0059261_3307	0.58	+0.1
3,432,706	+		Ga0059261_3307	0.58	-0.6
3,432,706	+		Ga0059261_3307	0.58	-0.1
3,432,706	+		Ga0059261_3307	0.58	-0.8
3,432,706	+		Ga0059261_3307	0.58	-0.2
3,432,706	+		Ga0059261_3307	0.58	+0.0
3,432,706	+		Ga0059261_3307	0.58	-1.0
3,432,706	+		Ga0059261_3307	0.58	-0.2
3,432,707	-		Ga0059261_3307	0.58	-0.2
3,432,707	-		Ga0059261_3307	0.58	-0.3
3,432,707	-		Ga0059261_3307	0.58	+0.1
3,432,707	-		Ga0059261_3307	0.58	+0.0
3,432,707	-		Ga0059261_3307	0.58	+0.3
3,432,707	-		Ga0059261_3307	0.58	+0.2
3,432,707	-		Ga0059261_3307	0.58	-0.5
3,432,707	-		Ga0059261_3307	0.58	+0.8
3,432,707	-		Ga0059261_3307	0.58	-0.5
3,432,785	-		Ga0059261_3307	0.77	+0.3
3,432,785	-		Ga0059261_3307	0.77	-1.1
3,432,785	-		Ga0059261_3307	0.77	+0.1
3,432,874	+				-0.2
3,432,874	+				+0.1
3,432,874	+				-0.5
3,432,874	+				-0.2
3,432,875	-				+2.6
3,432,875	-				+0.5
3,433,093	+		Ga0059261_3308	0.53	-0.4
3,433,093	+		Ga0059261_3308	0.53	+0.1
3,433,093	+		Ga0059261_3308	0.53	+0.0
3,433,094	-		Ga0059261_3308	0.53	+0.3
3,433,094	-		Ga0059261_3308	0.53	+0.8
3,433,277	-				+0.8
3,433,291	-				-0.4
3,433,477	-				+0.1
3,433,578	+		Ga0059261_3309	0.18	+0.6
3,433,578	+		Ga0059261_3309	0.18	+0.5
3,433,578	+		Ga0059261_3309	0.18	-0.2
3,433,578	+		Ga0059261_3309	0.18	+0.3
3,433,578	+		Ga0059261_3309	0.18	+0.3
3,433,578	+		Ga0059261_3309	0.18	+0.1
3,433,579	-		Ga0059261_3309	0.18	+0.2
3,433,579	-		Ga0059261_3309	0.18	+0.5
3,433,579	-		Ga0059261_3309	0.18	+1.0
3,433,746	+		Ga0059261_3309	0.32	+0.5
3,433,746	+		Ga0059261_3309	0.32	+0.3
3,433,747	-		Ga0059261_3309	0.32	+1.4
3,433,884	+		Ga0059261_3309	0.44	-1.4
3,433,884	+		Ga0059261_3309	0.44	+1.9
3,433,884	+		Ga0059261_3309	0.44	+1.0
3,433,885	-		Ga0059261_3309	0.44	+0.4
3,433,885	-		Ga0059261_3309	0.44	+0.7
3,433,885	-		Ga0059261_3309	0.44	+0.6
3,433,885	-		Ga0059261_3309	0.44	+0.7
3,433,885	-		Ga0059261_3309	0.44	+1.3
3,433,885	-		Ga0059261_3309	0.44	+0.0
3,433,950	+		Ga0059261_3309	0.50	+1.3
3,433,951	-		Ga0059261_3309	0.50	+0.4
3,433,951	-		Ga0059261_3309	0.50	+0.3
3,433,972	+		Ga0059261_3309	0.51	+1.1
3,433,972	+		Ga0059261_3309	0.51	+0.2
3,433,973	-		Ga0059261_3309	0.52	+0.6
3,433,973	-		Ga0059261_3309	0.52	+0.4
3,433,973	-		Ga0059261_3309	0.52	+0.7
3,433,973	-		Ga0059261_3309	0.52	+0.0
3,434,034	+		Ga0059261_3309	0.57	+0.2
3,434,034	+		Ga0059261_3309	0.57	+0.1
3,434,034	+		Ga0059261_3309	0.57	+0.5
3,434,128	-		Ga0059261_3309	0.65	-0.1
3,434,244	+		Ga0059261_3309	0.75	+0.8
3,434,298	+		Ga0059261_3309	0.79	-0.4
3,434,298	+		Ga0059261_3309	0.79	+0.5
3,434,298	+		Ga0059261_3309	0.79	-0.4
3,434,299	-		Ga0059261_3309	0.80	+0.6
3,434,356	-		Ga0059261_3309	0.84	+0.5
3,434,436	+				-0.6
3,434,489	+				-0.2
3,434,489	+				-0.6
3,434,489	+				+1.3
3,434,529	+				-1.1
3,434,529	+				+0.0
3,434,530	-				-1.8
3,434,530	-				-0.6
3,434,535	+				-0.8
3,434,535	+				+0.1
3,434,535	+				+0.7
3,434,613	+				-0.3
3,434,613	+				-0.5
3,434,613	+				+0.4
3,434,613	+				-0.2
3,434,613	+				-1.0
3,434,613	+				+0.3
3,434,613	+				+0.3
3,434,614	-				-0.1
3,434,614	-				-0.1
3,434,614	-				+1.7
3,434,614	-				-0.2
3,434,614	-				+0.2
3,434,614	-				+0.0
3,434,614	-				-1.1
3,434,614	-				-0.0
3,434,626	+				+1.0
3,434,626	+				+1.0
3,434,626	+				+0.1
3,434,626	+				-0.3
3,434,627	-				-0.3
3,434,714	+				-0.3
3,434,715	-				-0.5
3,434,715	-				-0.3
3,434,715	-				-0.1
3,434,715	-				+0.4
3,434,715	-				+0.1
3,434,716	+				+0.1
3,434,716	+				+0.1
3,434,716	+				-0.4
3,434,716	+				-0.6
3,434,716	+				-0.9
3,434,716	+				-0.5
3,434,717	-				+0.3
3,434,717	-				+0.2
3,434,717	-				-0.2
3,434,717	-				+0.0
3,434,717	-				+0.0
3,434,717	-				-0.0
3,434,717	-				+0.2
3,434,717	-				+0.4
3,434,717	-				-0.2
3,434,717	-				-0.1
3,434,717	-				-0.9
3,434,751	+		Ga0059261_3310	0.10	+0.0
3,434,751	+		Ga0059261_3310	0.10	-0.6
3,434,751	+		Ga0059261_3310	0.10	+0.7
3,434,751	+		Ga0059261_3310	0.10	-0.3
3,434,751	+		Ga0059261_3310	0.10	-0.1
3,434,751	+		Ga0059261_3310	0.10	+1.2
3,434,751	+		Ga0059261_3310	0.10	-0.1
3,434,752	-		Ga0059261_3310	0.11	+0.1
3,434,752	-		Ga0059261_3310	0.11	+0.5
3,434,752	-		Ga0059261_3310	0.11	+0.4
3,434,752	-		Ga0059261_3310	0.11	-0.2
3,434,752	-		Ga0059261_3310	0.11	+0.5
3,435,013	+		Ga0059261_3310	0.32	-0.1
3,435,013	+		Ga0059261_3310	0.32	-1.7
3,435,013	+		Ga0059261_3310	0.32	+0.1
3,435,013	+		Ga0059261_3310	0.32	+0.6
3,435,013	+		Ga0059261_3310	0.32	+0.3
3,435,014	-		Ga0059261_3310	0.32	-0.8
3,435,014	-		Ga0059261_3310	0.32	+0.4
3,435,014	-		Ga0059261_3310	0.32	+0.9
3,435,014	-		Ga0059261_3310	0.32	-0.1
3,435,014	-		Ga0059261_3310	0.32	+0.1
3,435,023	+		Ga0059261_3310	0.33	+0.1
3,435,073	+		Ga0059261_3310	0.37	-1.8
3,435,074	-		Ga0059261_3310	0.37	+0.9
3,435,074	-				+1.0
3,435,074	-		Ga0059261_3310	0.37	-0.1
3,435,074	-		Ga0059261_3310	0.37	-0.5
3,435,174	-		Ga0059261_3310	0.46	-2.5
3,435,394	+		Ga0059261_3310	0.64	+0.4
3,435,394	+		Ga0059261_3310	0.64	+0.6
3,435,394	+		Ga0059261_3310	0.64	-0.0
3,435,394	+		Ga0059261_3310	0.64	-0.2
3,435,395	-		Ga0059261_3310	0.64	-0.4
3,435,451	+		Ga0059261_3310	0.69	+0.9
3,435,451	+		Ga0059261_3310	0.69	+1.6
3,435,452	-		Ga0059261_3310	0.69	-1.0
3,435,452	-		Ga0059261_3310	0.69	+0.4
3,435,452	-		Ga0059261_3310	0.69	-0.1
3,435,452	-		Ga0059261_3310	0.69	+0.1
3,435,452	-		Ga0059261_3310	0.69	-0.7