Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2244

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,345,203	+		Ga0059261_2243	0.48	-1.6
2,345,203	+		Ga0059261_2243	0.48	-2.2
2,345,207	-		Ga0059261_2243	0.48	+0.2
2,345,207	-		Ga0059261_2243	0.48	-1.1
2,345,459	-				+1.2
2,345,633	-		Ga0059261_2243	0.76	-1.6
2,345,633	-		Ga0059261_2243	0.76	-1.7
2,345,633	-		Ga0059261_2243	0.76	-1.2
2,346,079	+				-0.5
2,346,079	+				-1.1
2,346,079	+				-1.6
2,346,080	-				+1.0
2,346,080	-				+0.5
2,346,447	+		Ga0059261_2244	0.13	+0.3
2,346,448	-		Ga0059261_2244	0.13	+0.2
2,346,450	-		Ga0059261_2244	0.13	-0.3
2,346,488	+		Ga0059261_2244	0.14	+0.2
2,346,593	+		Ga0059261_2244	0.18	+1.1
2,346,593	+		Ga0059261_2244	0.18	-0.8
2,346,761	+		Ga0059261_2244	0.24	-0.0
2,346,902	+		Ga0059261_2244	0.29	+0.0
2,346,902	+		Ga0059261_2244	0.29	+1.1
2,346,902	+		Ga0059261_2244	0.29	+1.0
2,346,902	+		Ga0059261_2244	0.29	+0.4
2,346,902	+		Ga0059261_2244	0.29	-0.4
2,346,903	-		Ga0059261_2244	0.29	+0.6
2,346,903	-		Ga0059261_2244	0.29	-0.0
2,346,910	-		Ga0059261_2244	0.30	+0.4
2,346,910	-		Ga0059261_2244	0.30	+0.0
2,346,957	+		Ga0059261_2244	0.31	+0.1
2,346,958	-		Ga0059261_2244	0.31	+0.7
2,346,959	+		Ga0059261_2244	0.31	-1.6
2,346,959	+		Ga0059261_2244	0.31	+0.0
2,346,959	+		Ga0059261_2244	0.31	+0.4
2,346,959	+		Ga0059261_2244	0.31	-0.2
2,346,959	+		Ga0059261_2244	0.31	+0.3
2,346,959	+		Ga0059261_2244	0.31	+0.4
2,346,959	+		Ga0059261_2244	0.31	-0.1
2,346,960	-		Ga0059261_2244	0.32	-0.4
2,346,960	-		Ga0059261_2244	0.32	+0.6
2,346,960	-		Ga0059261_2244	0.32	-0.1
2,346,960	-		Ga0059261_2244	0.32	+0.2
2,346,960	-		Ga0059261_2244	0.32	+0.9
2,346,960	-		Ga0059261_2244	0.32	+0.1
2,346,960	-		Ga0059261_2244	0.32	+0.8
2,347,073	+		Ga0059261_2244	0.36	+0.3
2,347,074	-		Ga0059261_2244	0.36	+0.6
2,347,074	-		Ga0059261_2244	0.36	-1.4
2,347,074	-				+2.6
2,347,074	-		Ga0059261_2244	0.36	+0.0
2,347,086	+		Ga0059261_2244	0.36	+0.2
2,347,087	-		Ga0059261_2244	0.36	+0.7
2,347,087	-		Ga0059261_2244	0.36	+0.1
2,347,087	-		Ga0059261_2244	0.36	+0.3
2,347,087	-		Ga0059261_2244	0.36	+0.5
2,347,087	-		Ga0059261_2244	0.36	-0.2
2,347,316	+		Ga0059261_2244	0.44	-0.6
2,347,316	+		Ga0059261_2244	0.44	-0.2
2,347,316	+		Ga0059261_2244	0.44	-0.6
2,347,316	+		Ga0059261_2244	0.44	+0.8
2,347,316	+		Ga0059261_2244	0.44	+0.5
2,347,316	+		Ga0059261_2244	0.44	-0.6
2,347,317	-		Ga0059261_2244	0.44	+0.4
2,347,317	-				+1.0
2,347,472	+		Ga0059261_2244	0.50	+1.4
2,347,479	+		Ga0059261_2244	0.50	+0.2
2,347,480	-		Ga0059261_2244	0.50	+0.2
2,347,480	-		Ga0059261_2244	0.50	+0.6
2,347,574	+		Ga0059261_2244	0.54	-0.4
2,347,575	-		Ga0059261_2244	0.54	+1.1
2,347,619	+		Ga0059261_2244	0.55	-0.4
2,347,619	+		Ga0059261_2244	0.55	+1.0
2,347,619	+		Ga0059261_2244	0.55	+0.6
2,347,620	-		Ga0059261_2244	0.55	+1.0
2,347,620	-		Ga0059261_2244	0.55	-0.1
2,347,620	-		Ga0059261_2244	0.55	+0.5
2,347,620	-		Ga0059261_2244	0.55	-0.7
2,347,725	+		Ga0059261_2244	0.59	-0.7
2,347,725	+		Ga0059261_2244	0.59	+0.9
2,347,725	+		Ga0059261_2244	0.59	-0.3
2,347,725	+		Ga0059261_2244	0.59	-0.8
2,347,725	+		Ga0059261_2244	0.59	+0.5
2,347,725	+		Ga0059261_2244	0.59	+0.3
2,347,725	+		Ga0059261_2244	0.59	+0.7
2,347,725	+				+1.8
2,347,725	+		Ga0059261_2244	0.59	+0.2
2,347,725	+		Ga0059261_2244	0.59	-0.4
2,347,726	-		Ga0059261_2244	0.59	+0.1
2,347,726	-		Ga0059261_2244	0.59	+0.7
2,347,726	-		Ga0059261_2244	0.59	+1.5
2,347,726	-				-0.8
2,347,726	-		Ga0059261_2244	0.59	+0.6
2,347,726	-		Ga0059261_2244	0.59	-0.1
2,347,726	-		Ga0059261_2244	0.59	+1.1
2,347,726	-		Ga0059261_2244	0.59	-0.7
2,347,726	-		Ga0059261_2244	0.59	-0.0
2,347,726	-		Ga0059261_2244	0.59	+1.0
2,347,754	+		Ga0059261_2244	0.60	+1.2
2,347,754	+				+1.6
2,347,754	+		Ga0059261_2244	0.60	+1.0
2,347,754	+		Ga0059261_2244	0.60	-0.2
2,347,754	+		Ga0059261_2244	0.60	-0.7
2,347,755	-		Ga0059261_2244	0.60	+0.7
2,347,755	-		Ga0059261_2244	0.60	+1.2
2,347,755	-		Ga0059261_2244	0.60	+0.4
2,347,910	+		Ga0059261_2244	0.66	+0.1
2,347,910	+		Ga0059261_2244	0.66	-0.6
2,347,911	-		Ga0059261_2244	0.66	+1.3
2,347,999	+		Ga0059261_2244	0.69	-1.0
2,347,999	+		Ga0059261_2244	0.69	+0.4
2,348,943	+				+0.0
2,348,943	+				+0.1
2,348,943	+				-0.3
2,348,944	-				+0.1
2,348,944	-				-0.4
2,348,944	-				-0.3
2,348,950	+				-2.6
2,348,950	+				+0.1
2,348,951	-				+0.3
2,348,951	-				-0.0
2,348,958	+				+0.8
2,348,958	+				-0.3
2,348,958	+				+0.2
2,348,959	-				+0.7
2,349,031	+				+0.4
2,349,031	+				-0.2
2,349,031	+				+0.0
2,349,031	+				-0.2
2,349,032	-				-0.1
2,349,033	+				+0.1
2,349,033	+				+0.3
2,349,034	-				+0.0
2,349,034	-				+0.3
2,349,034	-				+0.8
2,349,034	-				+0.9
2,349,039	+				+0.7
2,349,039	+				+1.5
2,349,039	+				-1.1
2,349,039	+				-0.4
2,349,039	+				+0.3
2,349,040	-				+0.4
2,349,040	-				+0.2
2,349,040	-				-0.1
2,349,040	-				+1.2
2,349,040	-				+0.4
2,349,093	+		Ga0059261_2245	0.13	+0.3
2,349,093	+		Ga0059261_2245	0.13	-2.2
2,349,093	+		Ga0059261_2245	0.13	-2.4
2,349,094	-		Ga0059261_2245	0.13	+1.2
2,349,139	+		Ga0059261_2245	0.34	+0.9
2,349,164	+		Ga0059261_2245	0.45	-1.9
2,349,164	+		Ga0059261_2245	0.45	+0.1
2,349,164	+		Ga0059261_2245	0.45	+0.2
2,349,165	-		Ga0059261_2245	0.46	-0.4
2,349,165	-		Ga0059261_2245	0.46	+0.1
2,349,165	-		Ga0059261_2245	0.46	+0.1
2,349,165	-		Ga0059261_2245	0.46	-0.1
2,349,196	-		Ga0059261_2245	0.60	+0.6
2,349,196	-		Ga0059261_2245	0.60	+0.3
2,349,236	+		Ga0059261_2245	0.78	-0.1
2,349,236	+		Ga0059261_2245	0.78	-1.2
2,349,236	+		Ga0059261_2245	0.78	+0.7
2,349,236	+		Ga0059261_2245	0.78	+0.2
2,349,236	+				+1.8
2,349,236	+		Ga0059261_2245	0.78	+1.1
2,349,236	+		Ga0059261_2245	0.78	-0.0
2,349,237	-		Ga0059261_2245	0.79	-0.2
2,349,237	-		Ga0059261_2245	0.79	+0.7
2,349,237	-		Ga0059261_2245	0.79	+0.3
2,349,237	-		Ga0059261_2245	0.79	-0.2
2,349,237	-		Ga0059261_2245	0.79	+0.0
2,349,237	-		Ga0059261_2245	0.79	-0.2
2,349,237	-		Ga0059261_2245	0.79	+0.6
2,349,252	+		Ga0059261_2245	0.85	+0.4
2,349,252	+		Ga0059261_2245	0.85	+0.5
2,349,252	+		Ga0059261_2245	0.85	+0.4
2,349,253	-		Ga0059261_2245	0.86	-0.2
2,349,253	-		Ga0059261_2245	0.86	-1.5
2,349,253	-		Ga0059261_2245	0.86	+0.8
2,349,317	+				+0.7
2,349,393	+				+0.6
2,349,393	+				-0.1
2,349,393	+				+1.0
2,349,393	+				+0.3
2,349,393	+				+0.8
2,349,393	+				-0.1
2,349,393	+				+0.9
2,349,393	+				-0.0
2,349,394	-				+0.5
2,349,394	-				+0.1
2,349,394	-				+1.1
2,349,394	-				+0.3
2,349,394	-				-0.2
2,349,394	-				+0.6
2,349,394	-				-0.5
2,349,394	-				-1.1
2,349,394	-				+0.6
2,349,394	-				-1.1
2,349,394	-				-0.5
2,349,394	-				+0.1
2,349,394	-				-0.0
2,349,394	-				+0.1
2,349,394	-				+0.8
2,349,394	-				+0.2
2,349,394	-				-0.7
2,349,394	-				-0.3
2,349,394	-				-0.5
2,349,422	+				-0.2
2,349,422	+				+0.2
2,349,422	+				-0.1
2,349,422	+				-1.0
2,349,422	+				-0.4
2,349,423	-				-0.3
2,349,423	-				-0.7
2,349,423	-				+0.2
2,349,434	+				+0.5
2,349,434	+				+0.5
2,349,434	+				+0.2
2,349,434	+				-0.6
2,349,435	-				+0.1
2,349,435	-				-1.4
2,349,435	-				-0.5
2,349,435	-				+0.6
2,349,435	-				-0.4
2,349,472	+				+0.2
2,349,472	+				+0.4
2,349,473	-				+0.1
2,349,473	-				+0.9
2,349,532	+				-0.2
2,349,532	+				-1.0
2,349,532	+				-0.1
2,349,532	+				+0.5
2,349,533	-				+1.3
2,349,533	-				+0.2
2,349,533	-				-0.3
2,349,533	-				+0.6
2,349,541	+				-0.4
2,349,541	+				-0.1
2,349,541	+				-0.4
2,349,541	+				+0.1
2,349,541	+				+0.1
2,349,541	+				+0.4
2,349,541	+				-0.3
2,349,542	-				+0.6
2,349,542	-				-0.1
2,349,542	-				+0.8
2,349,542	-				-0.2
2,349,590	-				+0.3
2,349,590	-				+0.1
2,349,590	-				-0.2
2,349,625	+				-0.7
2,349,626	-				-0.4
2,349,654	-				+0.6
2,349,674	-				-0.1
2,349,674	-				-0.2
2,349,674	-				+0.8
2,349,688	+				-0.0
2,349,688	+				+0.1
2,349,688	+				+0.2
2,349,688	+				-0.3
2,349,688	+				+0.1
2,349,688	+				+0.1
2,349,688	+				-0.2
2,349,688	+				-0.5
2,349,689	-				+0.1
2,349,689	-				+0.6
2,349,689	-				-0.5
2,349,772	+		Ga0059261_2246	0.12	+0.3
2,349,773	-		Ga0059261_2246	0.12	+0.4