Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02545

Experiment: PYE with Nickel (II) chloride 0.15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.15 mM
2,691,806	+		CCNA_02542	0.24	+0.6
2,691,814	-		CCNA_02542	0.25	+1.2
2,691,820	+		CCNA_02542	0.27	-0.9
2,691,856	+		CCNA_02542	0.35	+1.3
2,691,864	-		CCNA_02542	0.36	-0.8
2,691,879	-		CCNA_02542	0.40	+0.8
2,691,917	+		CCNA_02542	0.48	-0.3
2,691,925	-		CCNA_02542	0.50	-1.0
2,691,937	-		CCNA_02542	0.53	+0.4
2,691,956	+		CCNA_02542	0.57	+0.1
2,691,956	+		CCNA_02542	0.57	-0.5
2,692,003	+		CCNA_02542	0.67	+0.5
2,692,011	-		CCNA_02542	0.69	+0.7
2,692,073	+		CCNA_02542	0.83	-2.1
2,692,088	-		CCNA_02542	0.86	-0.5
2,692,468	+				-0.7
2,692,469	+				-2.3
2,692,515	-		CCNA_02544	0.16	-1.1
2,692,613	+		CCNA_02544	0.52	+0.3
2,692,613	+		CCNA_02544	0.52	-0.1
2,692,621	-		CCNA_02544	0.55	-0.2
2,692,651	+		CCNA_02544	0.66	+0.3
2,692,668	-		CCNA_02544	0.72	+0.6
2,692,707	+		CCNA_02544	0.86	+0.8
2,692,707	+		CCNA_02544	0.86	-0.3
2,692,715	-		CCNA_02544	0.89	+0.2
2,692,725	-				+0.4
2,692,740	+				-0.6
2,692,813	+				-0.0
2,692,813	+				-0.3
2,692,825	+				-1.8
2,692,856	+				-1.5
2,692,881	+				-0.5
2,692,890	+				-1.0
2,692,922	+				-1.5
2,692,941	-				-1.1
2,693,006	-		CCNA_02545	0.12	-0.1
2,693,009	+		CCNA_02545	0.12	-2.2
2,693,066	+		CCNA_02545	0.16	-0.3
2,693,071	+		CCNA_02545	0.16	-1.9
2,693,079	-		CCNA_02545	0.17	-3.0
2,693,106	-		CCNA_02545	0.18	-1.4
2,693,106	-		CCNA_02545	0.18	-2.5
2,693,116	-		CCNA_02545	0.19	-1.8
2,693,117	-		CCNA_02545	0.19	-1.4
2,693,158	+		CCNA_02545	0.21	-1.2
2,693,274	+		CCNA_02545	0.28	-1.0
2,693,277	-		CCNA_02545	0.28	-2.2
2,693,277	-		CCNA_02545	0.28	-1.2
2,693,298	+		CCNA_02545	0.30	+0.1
2,693,304	-		CCNA_02545	0.30	-2.7
2,693,316	-		CCNA_02545	0.31	-1.6
2,693,316	-		CCNA_02545	0.31	-1.3
2,693,316	-		CCNA_02545	0.31	-1.9
2,693,318	+		CCNA_02545	0.31	-0.9
2,693,349	-		CCNA_02545	0.33	+0.2
2,693,356	+		CCNA_02545	0.33	-1.0
2,693,356	+		CCNA_02545	0.33	+1.5
2,693,356	+		CCNA_02545	0.33	-1.8
2,693,364	-		CCNA_02545	0.34	-0.7
2,693,385	+		CCNA_02545	0.35	-1.8
2,693,387	-		CCNA_02545	0.35	-1.4
2,693,393	-		CCNA_02545	0.35	-1.6
2,693,393	-		CCNA_02545	0.35	-1.5
2,693,402	+		CCNA_02545	0.36	-1.1
2,693,461	+		CCNA_02545	0.39	-1.8
2,693,461	+		CCNA_02545	0.39	-0.6
2,693,461	+		CCNA_02545	0.39	-2.3
2,693,461	+		CCNA_02545	0.39	+0.4
2,693,461	+		CCNA_02545	0.39	-0.2
2,693,469	-		CCNA_02545	0.40	-1.4
2,693,469	-		CCNA_02545	0.40	-1.7
2,693,472	+		CCNA_02545	0.40	-1.3
2,693,472	+		CCNA_02545	0.40	-1.4
2,693,472	+		CCNA_02545	0.40	-1.1
2,693,472	+		CCNA_02545	0.40	-1.0
2,693,480	-		CCNA_02545	0.41	-1.2
2,693,512	-		CCNA_02545	0.43	-0.4
2,693,529	+		CCNA_02545	0.44	-0.0
2,693,531	+		CCNA_02545	0.44	-1.3
2,693,539	-		CCNA_02545	0.44	-1.7
2,693,539	-		CCNA_02545	0.44	-0.2
2,693,539	-		CCNA_02545	0.44	-0.9
2,693,548	+		CCNA_02545	0.45	-1.8
2,693,604	-		CCNA_02545	0.48	-0.6
2,693,622	+		CCNA_02545	0.49	-0.4
2,693,649	-		CCNA_02545	0.51	-1.0
2,693,659	-		CCNA_02545	0.51	-0.9
2,693,659	-		CCNA_02545	0.51	-0.8
2,693,730	+		CCNA_02545	0.56	+0.7
2,693,730	-		CCNA_02545	0.56	-1.6
2,693,922	+		CCNA_02545	0.67	-0.4
2,693,922	+		CCNA_02545	0.67	-2.2
2,693,930	-		CCNA_02545	0.68	-0.8
2,693,930	-		CCNA_02545	0.68	-0.5
2,693,937	+		CCNA_02545	0.68	-0.0
2,693,968	+		CCNA_02545	0.70	+1.0
2,693,968	+		CCNA_02545	0.70	-1.2
2,693,976	-		CCNA_02545	0.70	-1.3
2,693,981	-		CCNA_02545	0.71	-1.2
2,694,045	+		CCNA_02545	0.74	+0.3
2,694,053	-		CCNA_02545	0.75	-1.3
2,694,061	+		CCNA_02545	0.75	-0.7
2,694,090	-		CCNA_02545	0.77	-1.8
2,694,125	+		CCNA_02545	0.79	-0.4
2,694,132	+		CCNA_02545	0.80	-2.4
2,694,137	+		CCNA_02545	0.80	+0.1
2,694,145	-		CCNA_02545	0.80	-0.7
2,694,162	-		CCNA_02545	0.81	-1.5
2,694,164	+		CCNA_02545	0.81	-3.2
2,694,167	-		CCNA_02545	0.82	-1.3
2,694,219	+		CCNA_02545	0.85	-1.7
2,694,251	-		CCNA_02545	0.87	-0.5
2,694,256	+		CCNA_02545	0.87	-0.3
2,694,269	-		CCNA_02545	0.88	-1.0
2,694,274	-		CCNA_02545	0.88	-0.9
2,694,346	-				+0.7
2,694,346	-				-0.9
2,694,362	+				+1.5
2,694,367	+				-1.2
2,694,375	-				-0.8
2,694,395	+				-1.7
2,694,420	-				-0.6
2,694,432	+				-1.8
2,694,440	-				-1.0
2,694,440	-				-1.3
2,694,440	-				+0.8
2,694,488	-				+1.2
2,694,524	-				-0.7
2,694,551	-				+0.2
2,694,586	-				-0.6
2,694,625	-				+1.4
2,694,658	+				+0.0
2,694,751	-		CCNA_02546	0.13	+0.7
2,694,790	-		CCNA_02546	0.15	-0.2
2,694,802	-		CCNA_02546	0.16	+0.1
2,694,823	-		CCNA_02546	0.18	+0.7
2,694,866	-		CCNA_02546	0.21	+0.4
2,694,873	+		CCNA_02546	0.21	+0.9
2,694,906	+		CCNA_02546	0.24	-0.1
2,694,976	+		CCNA_02546	0.29	-1.5
2,695,059	-		CCNA_02546	0.35	+0.7
2,695,068	+		CCNA_02546	0.36	+1.0
2,695,083	+		CCNA_02546	0.37	-0.6
2,695,083	+		CCNA_02546	0.37	+0.8
2,695,091	-		CCNA_02546	0.37	+0.8
2,695,100	+		CCNA_02546	0.38	-1.2
2,695,103	-		CCNA_02546	0.38	+0.9
2,695,121	-		CCNA_02546	0.40	+0.6
2,695,129	-		CCNA_02546	0.40	+1.2
2,695,129	-		CCNA_02546	0.40	+0.7
2,695,133	+		CCNA_02546	0.41	+2.2
2,695,133	+		CCNA_02546	0.41	-0.0
2,695,141	-		CCNA_02546	0.41	+0.9
2,695,175	-		CCNA_02546	0.44	+1.7
2,695,250	+		CCNA_02546	0.49	+0.4
2,695,269	+		CCNA_02546	0.50	+0.5
2,695,277	-		CCNA_02546	0.51	+0.9
2,695,312	-		CCNA_02546	0.54	-0.0
2,695,324	+		CCNA_02546	0.55	+1.2
2,695,345	-		CCNA_02546	0.56	+1.3
2,695,345	-		CCNA_02546	0.56	-0.2
2,695,394	-		CCNA_02546	0.60	+0.8
2,695,394	-		CCNA_02546	0.60	+1.3
2,695,397	+		CCNA_02546	0.60	+0.1
2,695,407	-		CCNA_02546	0.61	+0.8
2,695,416	+		CCNA_02546	0.61	+1.5
2,695,422	-		CCNA_02546	0.62	+0.5
2,695,428	+		CCNA_02546	0.62	+1.5
2,695,450	-		CCNA_02546	0.64	+0.0
2,695,455	-		CCNA_02546	0.64	+0.9