Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02473

Experiment: PYE with Nickel (II) chloride 0.15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.15 mM
2,615,205	+		CCNA_02472	0.22	-1.3
2,615,205	+		CCNA_02472	0.22	-1.6
2,615,213	-		CCNA_02472	0.23	-0.6
2,615,213	-		CCNA_02472	0.23	-1.7
2,615,213	-		CCNA_02472	0.23	-2.6
2,615,215	-		CCNA_02472	0.23	-0.6
2,615,215	-		CCNA_02472	0.23	-1.6
2,615,312	-		CCNA_02472	0.30	-0.3
2,615,314	-		CCNA_02472	0.31	-0.7
2,615,314	-		CCNA_02472	0.31	-0.8
2,615,327	-		CCNA_02472	0.32	-0.3
2,615,341	-		CCNA_02472	0.33	-0.4
2,615,476	+		CCNA_02472	0.43	-1.2
2,615,476	+		CCNA_02472	0.43	-0.5
2,615,483	-		CCNA_02472	0.44	-0.1
2,615,500	+		CCNA_02472	0.45	-1.5
2,615,500	+		CCNA_02472	0.45	+1.3
2,615,500	+		CCNA_02472	0.45	-0.8
2,615,506	+		CCNA_02472	0.46	-1.7
2,615,527	-		CCNA_02472	0.48	-0.5
2,615,537	-		CCNA_02472	0.48	-2.7
2,615,537	-		CCNA_02472	0.48	-1.3
2,615,549	+		CCNA_02472	0.49	-2.8
2,615,561	-		CCNA_02472	0.50	+0.3
2,615,580	-		CCNA_02472	0.52	-0.7
2,615,580	-		CCNA_02472	0.52	-1.7
2,615,608	+		CCNA_02472	0.54	-0.2
2,615,616	-		CCNA_02472	0.55	+0.5
2,615,616	-		CCNA_02472	0.55	-2.1
2,615,616	-		CCNA_02472	0.55	+1.8
2,615,616	-		CCNA_02472	0.55	-1.5
2,615,648	-		CCNA_02472	0.57	-0.7
2,615,676	+		CCNA_02472	0.59	+0.1
2,615,684	-		CCNA_02472	0.60	+1.3
2,615,763	+		CCNA_02472	0.66	-1.2
2,615,773	+		CCNA_02472	0.67	-2.1
2,615,778	+		CCNA_02472	0.67	-0.1
2,615,780	+		CCNA_02472	0.68	-1.0
2,615,826	+		CCNA_02472	0.71	-0.5
2,615,831	+		CCNA_02472	0.72	-2.4
2,615,834	-		CCNA_02472	0.72	+0.7
2,615,834	-		CCNA_02472	0.72	-0.5
2,615,836	+		CCNA_02472	0.72	-0.8
2,615,836	+		CCNA_02472	0.72	+0.3
2,615,846	+		CCNA_02472	0.73	-3.2
2,615,868	-		CCNA_02472	0.75	-0.1
2,615,868	-		CCNA_02472	0.75	+0.7
2,615,923	-		CCNA_02472	0.79	-0.9
2,615,935	+		CCNA_02472	0.80	-2.0
2,615,949	-		CCNA_02472	0.81	-0.6
2,615,978	+		CCNA_02472	0.83	+0.1
2,616,014	-		CCNA_02472	0.86	-1.3
2,616,038	+		CCNA_02472	0.88	-0.7
2,616,046	-		CCNA_02472	0.89	-1.1
2,616,046	-		CCNA_02472	0.89	-2.4
2,616,139	+				+1.1
2,616,147	-				-0.3
2,616,147	-				-0.3
2,616,147	-				-2.1
2,616,147	-				-0.3
2,616,147	-				-1.7
2,616,343	+				-0.4
2,616,356	+				-1.7
2,616,371	+				-0.3
2,616,437	+				-1.6
2,616,475	+				+0.2
2,616,505	+		CCNA_02473	0.11	-1.3
2,616,505	+		CCNA_02473	0.11	-0.1
2,616,506	-		CCNA_02473	0.11	+2.5
2,616,506	-		CCNA_02473	0.11	-0.7
2,616,570	+		CCNA_02473	0.13	-0.6
2,616,576	+		CCNA_02473	0.13	-1.5
2,616,590	-		CCNA_02473	0.14	-0.7
2,616,597	+		CCNA_02473	0.14	-0.7
2,616,605	-		CCNA_02473	0.14	-1.2
2,616,616	-		CCNA_02473	0.14	-0.7
2,616,667	+		CCNA_02473	0.16	-1.3
2,616,667	+		CCNA_02473	0.16	-1.2
2,616,668	+		CCNA_02473	0.16	+1.5
2,616,675	-		CCNA_02473	0.16	-3.1
2,616,691	-		CCNA_02473	0.17	+2.1
2,616,695	+		CCNA_02473	0.17	+0.3
2,616,695	+		CCNA_02473	0.17	+0.2
2,616,695	+		CCNA_02473	0.17	-0.1
2,616,695	+		CCNA_02473	0.17	+0.5
2,616,703	-		CCNA_02473	0.17	-0.2
2,616,703	-		CCNA_02473	0.17	-1.9
2,616,703	-		CCNA_02473	0.17	-1.4
2,616,703	-		CCNA_02473	0.17	-1.0
2,616,703	-		CCNA_02473	0.17	-1.7
2,616,703	-		CCNA_02473	0.17	-1.0
2,616,708	-		CCNA_02473	0.17	-0.7
2,616,708	-		CCNA_02473	0.17	-0.9
2,616,714	+		CCNA_02473	0.18	-0.8
2,616,714	+		CCNA_02473	0.18	-2.6
2,616,714	+		CCNA_02473	0.18	-1.8
2,616,722	-		CCNA_02473	0.18	+0.1
2,616,722	-		CCNA_02473	0.18	-0.4
2,616,722	-		CCNA_02473	0.18	+0.0
2,616,722	-		CCNA_02473	0.18	+0.2
2,616,722	-		CCNA_02473	0.18	-0.2
2,616,722	-		CCNA_02473	0.18	+0.2
2,616,746	-		CCNA_02473	0.19	+1.1
2,616,749	+		CCNA_02473	0.19	-1.1
2,616,756	-		CCNA_02473	0.19	-1.1
2,616,778	+		CCNA_02473	0.20	-1.7
2,616,791	+		CCNA_02473	0.20	-1.9
2,616,813	+		CCNA_02473	0.21	-0.7
2,616,845	+		CCNA_02473	0.22	-0.3
2,616,846	-		CCNA_02473	0.22	-0.5
2,616,851	+		CCNA_02473	0.22	-1.3
2,616,882	+		CCNA_02473	0.23	+0.0
2,616,904	+		CCNA_02473	0.24	-0.8
2,616,913	-		CCNA_02473	0.24	-2.7
2,616,913	-		CCNA_02473	0.24	-1.8
2,616,913	-		CCNA_02473	0.24	-0.7
2,616,913	-		CCNA_02473	0.24	-1.5
2,616,936	-		CCNA_02473	0.25	-0.7
2,616,936	-		CCNA_02473	0.25	+0.5
2,616,946	+		CCNA_02473	0.25	+0.0
2,616,946	+		CCNA_02473	0.25	-1.5
2,616,946	+		CCNA_02473	0.25	+0.2
2,616,946	+		CCNA_02473	0.25	-0.4
2,616,946	+		CCNA_02473	0.25	+0.3
2,616,946	+		CCNA_02473	0.25	+0.8
2,616,946	+		CCNA_02473	0.25	-0.9
2,616,954	-		CCNA_02473	0.25	+0.8
2,616,954	-		CCNA_02473	0.25	-2.6
2,616,954	-		CCNA_02473	0.25	+0.7
2,616,954	-		CCNA_02473	0.25	-0.6
2,616,954	-		CCNA_02473	0.25	+0.6
2,616,954	-		CCNA_02473	0.25	+0.6
2,616,954	-		CCNA_02473	0.25	-1.9
2,616,954	-		CCNA_02473	0.25	-0.7
2,616,954	-		CCNA_02473	0.25	-2.1
2,617,020	+		CCNA_02473	0.27	-1.1
2,617,020	+		CCNA_02473	0.27	-1.0
2,617,028	-		CCNA_02473	0.27	-1.7
2,617,028	-		CCNA_02473	0.27	-0.6
2,617,028	-		CCNA_02473	0.27	+0.5
2,617,064	-		CCNA_02473	0.29	-0.4
2,617,069	+		CCNA_02473	0.29	-1.3
2,617,069	+		CCNA_02473	0.29	-0.9
2,617,077	-		CCNA_02473	0.29	-1.3
2,617,142	-		CCNA_02473	0.31	-0.1
2,617,176	-		CCNA_02473	0.32	-2.0
2,617,184	+		CCNA_02473	0.32	-0.2
2,617,184	+		CCNA_02473	0.32	-1.5
2,617,192	-		CCNA_02473	0.33	-1.6
2,617,230	+		CCNA_02473	0.34	-0.5
2,617,234	-		CCNA_02473	0.34	+1.1
2,617,234	-		CCNA_02473	0.34	-0.7
2,617,238	-		CCNA_02473	0.34	-2.0
2,617,301	+		CCNA_02473	0.36	-0.0
2,617,301	+		CCNA_02473	0.36	-1.1
2,617,301	+		CCNA_02473	0.36	+0.7
2,617,301	+		CCNA_02473	0.36	-0.1
2,617,309	-		CCNA_02473	0.36	+0.9
2,617,335	-		CCNA_02473	0.37	+0.2
2,617,337	+		CCNA_02473	0.37	-1.8
2,617,358	+		CCNA_02473	0.38	-1.2
2,617,363	+		CCNA_02473	0.38	-0.5
2,617,363	+		CCNA_02473	0.38	-2.0
2,617,369	+				+2.2
2,617,369	+		CCNA_02473	0.38	-1.7
2,617,370	+		CCNA_02473	0.38	-0.9
2,617,370	+		CCNA_02473	0.38	-0.8
2,617,371	-		CCNA_02473	0.38	-1.1
2,617,389	+		CCNA_02473	0.39	-2.2
2,617,397	-		CCNA_02473	0.39	-2.0
2,617,404	+		CCNA_02473	0.39	-1.6
2,617,412	-		CCNA_02473	0.40	-1.2
2,617,412	-		CCNA_02473	0.40	-1.6
2,617,412	-		CCNA_02473	0.40	-1.5
2,617,450	+		CCNA_02473	0.41	+0.2
2,617,450	+		CCNA_02473	0.41	-1.8
2,617,477	-		CCNA_02473	0.42	-1.8
2,617,543	+		CCNA_02473	0.44	-2.7
2,617,558	+		CCNA_02473	0.44	+0.1
2,617,558	+		CCNA_02473	0.44	-0.4
2,617,572	+		CCNA_02473	0.45	-0.8
2,617,582	+		CCNA_02473	0.45	-1.5
2,617,582	+		CCNA_02473	0.45	-0.2
2,617,597	-		CCNA_02473	0.45	-0.2
2,617,648	-		CCNA_02473	0.47	-1.7
2,617,673	-		CCNA_02473	0.48	+0.5
2,617,689	+		CCNA_02473	0.48	-2.3
2,617,689	+		CCNA_02473	0.48	-1.2
2,617,704	+		CCNA_02473	0.49	-0.3
2,617,730	+		CCNA_02473	0.50	-1.3
2,617,816	-		CCNA_02473	0.52	-2.0
2,617,832	+		CCNA_02473	0.53	+1.3
2,617,832	+		CCNA_02473	0.53	-0.5
2,617,834	-		CCNA_02473	0.53	-1.7
2,617,840	-		CCNA_02473	0.53	-2.1
2,617,863	+		CCNA_02473	0.54	-1.7
2,617,874	+		CCNA_02473	0.54	+0.3
2,617,875	+		CCNA_02473	0.54	-0.2
2,617,893	+		CCNA_02473	0.55	-2.2
2,617,901	-		CCNA_02473	0.55	-1.3
2,617,962	-		CCNA_02473	0.57	-2.1
2,617,987	+		CCNA_02473	0.58	+0.6
2,617,987	+		CCNA_02473	0.58	-1.6
2,617,987	+		CCNA_02473	0.58	-2.3
2,617,988	+		CCNA_02473	0.58	-2.7
2,617,995	-		CCNA_02473	0.58	+0.1
2,617,999	+		CCNA_02473	0.58	-1.0
2,617,999	+		CCNA_02473	0.58	-0.5
2,618,109	+		CCNA_02473	0.61	-0.7
2,618,109	+		CCNA_02473	0.61	-1.2
2,618,117	-		CCNA_02473	0.62	-1.0
2,618,117	-		CCNA_02473	0.62	+1.1
2,618,117	-		CCNA_02473	0.62	-0.5
2,618,145	-		CCNA_02473	0.63	-1.2
2,618,170	+		CCNA_02473	0.63	-1.1
2,618,171	-		CCNA_02473	0.63	-1.3
2,618,212	-		CCNA_02473	0.65	-0.5
2,618,235	-		CCNA_02473	0.65	-1.2
2,618,253	+		CCNA_02473	0.66	-1.7
2,618,263	+		CCNA_02473	0.66	-0.4
2,618,313	-		CCNA_02473	0.68	-0.8
2,618,313	-		CCNA_02473	0.68	-1.0
2,618,317	+		CCNA_02473	0.68	-0.8
2,618,357	-		CCNA_02473	0.69	-2.1
2,618,359	+		CCNA_02473	0.69	-0.7
2,618,359	+				+0.5
2,618,359	+		CCNA_02473	0.69	-0.7
2,618,359	+		CCNA_02473	0.69	-0.1
2,618,359	+		CCNA_02473	0.69	-0.7
2,618,367	-		CCNA_02473	0.70	+0.8
2,618,367	-		CCNA_02473	0.70	-3.7
2,618,367	-		CCNA_02473	0.70	-0.6
2,618,374	-		CCNA_02473	0.70	+0.3
2,618,402	+		CCNA_02473	0.71	-1.5
2,618,402	+		CCNA_02473	0.71	-0.3
2,618,402	+		CCNA_02473	0.71	-1.8
2,618,402	+		CCNA_02473	0.71	-1.0
2,618,402	+		CCNA_02473	0.71	-2.1
2,618,402	+		CCNA_02473	0.71	-0.9
2,618,402	+		CCNA_02473	0.71	-0.4
2,618,402	+		CCNA_02473	0.71	-0.1
2,618,410	-		CCNA_02473	0.71	-2.0
2,618,410	-		CCNA_02473	0.71	-0.4
2,618,410	-		CCNA_02473	0.71	-1.7
2,618,410	-		CCNA_02473	0.71	-2.4
2,618,410	-		CCNA_02473	0.71	-2.1
2,618,410	-		CCNA_02473	0.71	-2.3
2,618,485	+		CCNA_02473	0.73	+0.8
2,618,485	+		CCNA_02473	0.73	-2.3
2,618,485	-		CCNA_02473	0.73	-2.7
2,618,524	+		CCNA_02473	0.75	-0.4
2,618,524	+		CCNA_02473	0.75	-0.7
2,618,524	+		CCNA_02473	0.75	-0.4
2,618,524	+		CCNA_02473	0.75	-0.9
2,618,532	-		CCNA_02473	0.75	+0.2
2,618,532	-		CCNA_02473	0.75	-0.9
2,618,534	+		CCNA_02473	0.75	+0.2
2,618,612	-		CCNA_02473	0.77	+0.3
2,618,612	-		CCNA_02473	0.77	-2.1
2,618,620	-		CCNA_02473	0.78	-1.5
2,618,620	-		CCNA_02473	0.78	-0.5
2,618,620	-		CCNA_02473	0.78	-2.6
2,618,639	-		CCNA_02473	0.78	-0.3
2,618,649	+		CCNA_02473	0.78	+0.2
2,618,649	+		CCNA_02473	0.78	+0.9
2,618,654	+		CCNA_02473	0.79	-3.5
2,618,654	+		CCNA_02473	0.79	+0.3
2,618,664	+		CCNA_02473	0.79	-1.9
2,618,664	+		CCNA_02473	0.79	-1.0
2,618,672	-		CCNA_02473	0.79	-1.4
2,618,712	+		CCNA_02473	0.80	-0.6
2,618,712	+		CCNA_02473	0.80	+0.9
2,618,712	+		CCNA_02473	0.80	+0.5
2,618,720	-		CCNA_02473	0.81	-0.1
2,618,725	-		CCNA_02473	0.81	+0.5
2,618,733	+		CCNA_02473	0.81	+0.3
2,618,773	+		CCNA_02473	0.82	-1.9
2,618,800	-		CCNA_02473	0.83	-2.3
2,618,881	+		CCNA_02473	0.86	-0.3
2,618,888	+		CCNA_02473	0.86	-1.2
2,618,889	-		CCNA_02473	0.86	-1.1
2,618,893	+		CCNA_02473	0.86	-0.4
2,618,901	-		CCNA_02473	0.86	-0.6
2,618,903	+		CCNA_02473	0.86	-1.1
2,618,947	+		CCNA_02473	0.88	-1.5
2,618,955	-		CCNA_02473	0.88	-1.8
2,619,028	-				-1.0
2,619,035	+				-0.7
2,619,035	+				-1.2
2,619,045	-				-1.4
2,619,119	+				-0.4
2,619,119	+				-0.8
2,619,119	+				-1.6
2,619,127	-				-2.2
2,619,142	+				-0.2
2,619,142	+				-1.6
2,619,172	-				-2.3
2,619,172	-				-2.5
2,619,212	+				-0.1
2,619,221	+				-0.9
2,619,260	+				-0.7
2,619,263	-				-0.9
2,619,277	+				-0.9
2,619,285	-				-1.1
2,619,302	+				-1.1
2,619,316	-				-1.4
2,619,335	+				-0.6
2,619,335	+				-1.0
2,619,343	-				+0.1
2,619,352	+				-1.3
2,619,360	-				-0.7
2,619,362	+				-0.3
2,619,398	+				-0.4
2,619,398	+				+0.1
2,619,398	+				-0.8
2,619,406	-				-0.1
2,619,412	+				+1.0
2,619,412	+				-1.6
2,619,412	+				-0.1
2,619,420	-				+0.9
2,619,420	-				-0.4
2,619,420	-				-0.5
2,619,425	-				+0.1
2,619,439	-				+0.1
2,619,488	+				-1.2
2,619,488	+				-0.5
2,619,519	-				-0.5
2,619,549	+		CCNA_02474	0.13	+1.3
2,619,554	+		CCNA_02474	0.14	+0.6
2,619,646	-		CCNA_02474	0.34	-1.2
2,619,659	+		CCNA_02474	0.36	+2.1
2,619,662	-		CCNA_02474	0.37	-0.5
2,619,666	-		CCNA_02474	0.38	-0.6
2,619,666	-		CCNA_02474	0.38	+0.0
2,619,714	+		CCNA_02474	0.48	-1.1
2,619,732	+		CCNA_02474	0.52	-0.7
2,619,741	+		CCNA_02474	0.54	-0.8
2,619,766	-		CCNA_02474	0.59	-0.2
2,619,769	+		CCNA_02474	0.60	-0.9
2,619,777	-		CCNA_02474	0.61	+0.7
2,619,777	-		CCNA_02474	0.61	+0.5
2,619,797	+		CCNA_02474	0.65	+0.1
2,619,806	+		CCNA_02474	0.67	+0.2
2,619,815	-		CCNA_02474	0.69	-0.5
2,619,848	-		CCNA_02474	0.76	-0.9
2,619,917	+				+1.9
2,619,927	-				+0.0
2,619,954	-				-0.5
2,619,954	-				+0.8
2,619,956	+				-1.3
2,620,021	+				-1.4
2,620,021	+				-1.8
2,620,021	+				+0.2
2,620,022	+				-0.8
2,620,029	-				+0.3
2,620,037	+				+1.7
2,620,037	+				-0.1
2,620,045	-				-0.8
2,620,045	-				+0.2
2,620,064	+				-1.7
2,620,138	+		CCNA_02475	0.12	+0.3
2,620,146	-		CCNA_02475	0.13	-0.1
2,620,146	-		CCNA_02475	0.13	-0.9
2,620,146	-		CCNA_02475	0.13	-0.1
2,620,146	-		CCNA_02475	0.13	-0.3
2,620,189	-		CCNA_02475	0.19	-0.2
2,620,203	+		CCNA_02475	0.21	-1.2
2,620,203	+		CCNA_02475	0.21	-0.3
2,620,211	-		CCNA_02475	0.22	-0.5
2,620,224	+		CCNA_02475	0.24	-0.6
2,620,232	-		CCNA_02475	0.25	-0.3
2,620,261	-		CCNA_02475	0.29	-0.2
2,620,319	+		CCNA_02475	0.37	-0.8
2,620,327	-		CCNA_02475	0.38	+0.2
2,620,327	-		CCNA_02475	0.38	+0.0
2,620,327	-		CCNA_02475	0.38	-0.2
2,620,327	-		CCNA_02475	0.38	+0.2