Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_829

Experiment: sodium fluoride 35 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_828 and Ac3H11_829 overlap by 4 nucleotidesAc3H11_829 and Ac3H11_830 overlap by 9 nucleotides Ac3H11_828 - hypothetical protein, at 111,942 to 113,129 _828 Ac3H11_829 - hypothetical protein, at 113,126 to 113,371 _829 Ac3H11_830 - Probable sulfite reductase, at 113,363 to 114,577 _830 Position (kb) 113 114Strain fitness (log2 ratio) -2 -1 0 1 2at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.183 kb on + strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.184 kb on - strand, within Ac3H11_828at 112.355 kb on - strand, within Ac3H11_828at 112.627 kb on + strand, within Ac3H11_828at 112.627 kb on + strand, within Ac3H11_828at 112.628 kb on - strand, within Ac3H11_828at 112.628 kb on - strand, within Ac3H11_828at 112.628 kb on - strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.690 kb on + strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.691 kb on - strand, within Ac3H11_828at 112.696 kb on + strand, within Ac3H11_828at 112.696 kb on + strand, within Ac3H11_828at 112.696 kb on + strand, within Ac3H11_828at 112.696 kb on + strand, within Ac3H11_828at 112.696 kb on + strand, within Ac3H11_828at 112.697 kb on - strand, within Ac3H11_828at 112.697 kb on - strand, within Ac3H11_828at 112.697 kb on - strand, within Ac3H11_828at 112.697 kb on - strand, within Ac3H11_828at 112.721 kb on - strand, within Ac3H11_828at 112.721 kb on - strand, within Ac3H11_828at 112.721 kb on - strand, within Ac3H11_828at 112.780 kb on + strand, within Ac3H11_828at 112.780 kb on + strand, within Ac3H11_828at 112.780 kb on + strand, within Ac3H11_828at 112.780 kb on + strand, within Ac3H11_828at 112.780 kb on + strand, within Ac3H11_828at 112.780 kb on + strand, within Ac3H11_828at 112.780 kb on + strand, within Ac3H11_828at 112.780 kb on + strand, within Ac3H11_828at 112.781 kb on - strand, within Ac3H11_828at 112.781 kb on - strand, within Ac3H11_828at 112.781 kb on - strand, within Ac3H11_828at 112.781 kb on - strand, within Ac3H11_828at 112.781 kb on - strand, within Ac3H11_828at 112.781 kb on - strand, within Ac3H11_828at 112.781 kb on - strand, within Ac3H11_828at 112.781 kb on - strand, within Ac3H11_828at 112.816 kb on + strand, within Ac3H11_828at 112.816 kb on + strand, within Ac3H11_828at 112.817 kb on - strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.863 kb on + strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.864 kb on - strand, within Ac3H11_828at 112.929 kb on + strand, within Ac3H11_828at 113.169 kb on + strand, within Ac3H11_829at 113.170 kb on - strand, within Ac3H11_829at 113.170 kb on - strand, within Ac3H11_829at 113.170 kb on - strand, within Ac3H11_829at 113.408 kb on - strandat 113.504 kb on + strand, within Ac3H11_830at 113.504 kb on + strand, within Ac3H11_830at 113.504 kb on + strand, within Ac3H11_830at 113.505 kb on - strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.612 kb on + strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.613 kb on - strand, within Ac3H11_830at 113.909 kb on + strand, within Ac3H11_830at 113.909 kb on + strand, within Ac3H11_830at 113.910 kb on - strand, within Ac3H11_830at 113.910 kb on - strand, within Ac3H11_830at 114.083 kb on + strand, within Ac3H11_830at 114.107 kb on + strand, within Ac3H11_830at 114.107 kb on + strand, within Ac3H11_830at 114.107 kb on + strand, within Ac3H11_830at 114.107 kb on + strand, within Ac3H11_830at 114.108 kb on - strand, within Ac3H11_830at 114.108 kb on - strand, within Ac3H11_830at 114.108 kb on - strand, within Ac3H11_830at 114.108 kb on - strand, within Ac3H11_830at 114.108 kb on - strand, within Ac3H11_830at 114.108 kb on - strand, within Ac3H11_830at 114.108 kb on - strand, within Ac3H11_830at 114.108 kb on - strand, within Ac3H11_830

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Per-strain Table

Position Strand Gene LocusTag Fraction sodium fluoride 35 mM
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112,183 + Ac3H11_828 0.20 -0.3
112,183 + Ac3H11_828 0.20 -0.8
112,183 + Ac3H11_828 0.20 +0.3
112,183 + Ac3H11_828 0.20 +0.1
112,183 + Ac3H11_828 0.20 -0.5
112,183 + Ac3H11_828 0.20 +0.6
112,183 + Ac3H11_828 0.20 +1.4
112,183 + Ac3H11_828 0.20 +0.2
112,183 + Ac3H11_828 0.20 -0.5
112,183 + Ac3H11_828 0.20 -1.1
112,184 - Ac3H11_828 0.20 -0.5
112,184 - Ac3H11_828 0.20 -0.9
112,184 - Ac3H11_828 0.20 -1.8
112,184 - Ac3H11_828 0.20 +1.2
112,184 - Ac3H11_828 0.20 -0.1
112,184 - Ac3H11_828 0.20 -0.9
112,184 - Ac3H11_828 0.20 +0.2
112,184 - Ac3H11_828 0.20 +0.2
112,184 - Ac3H11_828 0.20 +0.6
112,184 - Ac3H11_828 0.20 +0.4
112,184 - Ac3H11_828 0.20 +0.3
112,184 - Ac3H11_828 0.20 +0.2
112,355 - Ac3H11_828 0.35 +0.6
112,627 + Ac3H11_828 0.58 -0.8
112,627 + Ac3H11_828 0.58 +0.3
112,628 - Ac3H11_828 0.58 +0.7
112,628 - Ac3H11_828 0.58 +0.0
112,628 - Ac3H11_828 0.58 -1.1
112,690 + Ac3H11_828 0.63 +0.1
112,690 + Ac3H11_828 0.63 +0.5
112,690 + Ac3H11_828 0.63 -0.5
112,690 + Ac3H11_828 0.63 -0.3
112,690 + Ac3H11_828 0.63 +1.2
112,690 + Ac3H11_828 0.63 -1.4
112,690 + Ac3H11_828 0.63 +0.3
112,690 + Ac3H11_828 0.63 -0.5
112,690 + Ac3H11_828 0.63 +0.4
112,690 + Ac3H11_828 0.63 -0.7
112,690 + Ac3H11_828 0.63 -0.4
112,690 + Ac3H11_828 0.63 +0.8
112,690 + Ac3H11_828 0.63 +0.5
112,690 + Ac3H11_828 0.63 -0.9
112,690 + Ac3H11_828 0.63 +0.1
112,690 + Ac3H11_828 0.63 -0.3
112,690 + Ac3H11_828 0.63 +0.8
112,691 - Ac3H11_828 0.63 +0.5
112,691 - Ac3H11_828 0.63 +0.3
112,691 - Ac3H11_828 0.63 +1.9
112,691 - Ac3H11_828 0.63 -0.4
112,691 - Ac3H11_828 0.63 -0.8
112,691 - Ac3H11_828 0.63 +0.1
112,691 - Ac3H11_828 0.63 -0.4
112,691 - Ac3H11_828 0.63 +0.9
112,691 - Ac3H11_828 0.63 +0.0
112,691 - Ac3H11_828 0.63 -0.5
112,691 - Ac3H11_828 0.63 +2.0
112,691 - Ac3H11_828 0.63 +0.2
112,691 - Ac3H11_828 0.63 -1.3
112,691 - Ac3H11_828 0.63 +0.7
112,691 - Ac3H11_828 0.63 +0.1
112,691 - Ac3H11_828 0.63 -0.0
112,691 - Ac3H11_828 0.63 +0.2
112,691 - Ac3H11_828 0.63 -0.4
112,691 - Ac3H11_828 0.63 -0.4
112,691 - Ac3H11_828 0.63 +0.4
112,691 - Ac3H11_828 0.63 -0.3
112,691 - Ac3H11_828 0.63 +0.5
112,696 + Ac3H11_828 0.63 +0.6
112,696 + Ac3H11_828 0.63 -0.3
112,696 + Ac3H11_828 0.63 +1.6
112,696 + Ac3H11_828 0.63 +0.4
112,696 + Ac3H11_828 0.63 -0.6
112,697 - Ac3H11_828 0.64 -0.1
112,697 - Ac3H11_828 0.64 +0.7
112,697 - Ac3H11_828 0.64 +0.3
112,697 - Ac3H11_828 0.64 -0.7
112,721 - Ac3H11_828 0.66 -1.5
112,721 - Ac3H11_828 0.66 -0.6
112,721 - Ac3H11_828 0.66 +0.2
112,780 + Ac3H11_828 0.71 -0.2
112,780 + Ac3H11_828 0.71 +0.6
112,780 + Ac3H11_828 0.71 +2.2
112,780 + Ac3H11_828 0.71 +0.6
112,780 + Ac3H11_828 0.71 -0.3
112,780 + Ac3H11_828 0.71 +0.3
112,780 + Ac3H11_828 0.71 -0.1
112,780 + Ac3H11_828 0.71 +0.6
112,781 - Ac3H11_828 0.71 +0.1
112,781 - Ac3H11_828 0.71 +0.7
112,781 - Ac3H11_828 0.71 +0.1
112,781 - Ac3H11_828 0.71 -0.4
112,781 - Ac3H11_828 0.71 -2.5
112,781 - Ac3H11_828 0.71 -0.9
112,781 - Ac3H11_828 0.71 +0.2
112,781 - Ac3H11_828 0.71 -0.3
112,816 + Ac3H11_828 0.74 +0.2
112,816 + Ac3H11_828 0.74 +0.1
112,817 - Ac3H11_828 0.74 +0.4
112,863 + Ac3H11_828 0.78 +0.4
112,863 + Ac3H11_828 0.78 +1.5
112,863 + Ac3H11_828 0.78 -0.0
112,863 + Ac3H11_828 0.78 +0.8
112,863 + Ac3H11_828 0.78 -0.9
112,863 + Ac3H11_828 0.78 +0.3
112,863 + Ac3H11_828 0.78 +0.3
112,863 + Ac3H11_828 0.78 -1.3
112,863 + Ac3H11_828 0.78 +0.1
112,863 + Ac3H11_828 0.78 -0.2
112,863 + Ac3H11_828 0.78 +1.9
112,863 + Ac3H11_828 0.78 -0.1
112,863 + Ac3H11_828 0.78 -0.0
112,863 + Ac3H11_828 0.78 -0.4
112,863 + Ac3H11_828 0.78 +0.0
112,863 + Ac3H11_828 0.78 -0.5
112,863 + Ac3H11_828 0.78 -0.8
112,863 + Ac3H11_828 0.78 +0.9
112,864 - Ac3H11_828 0.78 -0.2
112,864 - Ac3H11_828 0.78 +1.0
112,864 - Ac3H11_828 0.78 -0.3
112,864 - Ac3H11_828 0.78 +0.6
112,864 - Ac3H11_828 0.78 +0.5
112,864 - Ac3H11_828 0.78 +0.6
112,864 - Ac3H11_828 0.78 +0.9
112,864 - Ac3H11_828 0.78 -0.1
112,864 - Ac3H11_828 0.78 -0.2
112,864 - Ac3H11_828 0.78 +0.6
112,864 - Ac3H11_828 0.78 +0.7
112,864 - Ac3H11_828 0.78 -0.5
112,864 - Ac3H11_828 0.78 +0.2
112,864 - Ac3H11_828 0.78 -0.1
112,864 - Ac3H11_828 0.78 +0.4
112,929 + Ac3H11_828 0.83 +1.2
113,169 + Ac3H11_829 0.17 +0.5
113,170 - Ac3H11_829 0.18 +0.9
113,170 - Ac3H11_829 0.18 +1.2
113,170 - Ac3H11_829 0.18 +0.7
113,408 - -0.0
113,504 + Ac3H11_830 0.12 +0.0
113,504 + Ac3H11_830 0.12 +1.2
113,504 + Ac3H11_830 0.12 +0.3
113,505 - Ac3H11_830 0.12 +0.3
113,612 + Ac3H11_830 0.20 -0.6
113,612 + Ac3H11_830 0.20 +0.1
113,612 + Ac3H11_830 0.20 -1.0
113,612 + Ac3H11_830 0.20 +0.1
113,612 + Ac3H11_830 0.20 +0.2
113,612 + Ac3H11_830 0.20 -0.4
113,612 + Ac3H11_830 0.20 -0.1
113,612 + Ac3H11_830 0.20 -0.3
113,612 + Ac3H11_830 0.20 +0.2
113,612 + Ac3H11_830 0.20 +0.2
113,612 + Ac3H11_830 0.20 +1.0
113,612 + Ac3H11_830 0.20 +0.6
113,612 + Ac3H11_830 0.20 +0.9
113,612 + Ac3H11_830 0.20 -0.3
113,612 + Ac3H11_830 0.20 -0.2
113,612 + Ac3H11_830 0.20 -0.4
113,612 + Ac3H11_830 0.20 +0.6
113,612 + Ac3H11_830 0.20 -0.4
113,612 + Ac3H11_830 0.20 +0.3
113,612 + Ac3H11_830 0.20 -1.2
113,612 + Ac3H11_830 0.20 -0.6
113,612 + Ac3H11_830 0.20 +0.2
113,612 + Ac3H11_830 0.20 -0.2
113,612 + Ac3H11_830 0.20 -0.4
113,613 - Ac3H11_830 0.21 -0.2
113,613 - Ac3H11_830 0.21 +0.6
113,613 - Ac3H11_830 0.21 -1.5
113,613 - Ac3H11_830 0.21 +0.5
113,613 - Ac3H11_830 0.21 +0.3
113,613 - Ac3H11_830 0.21 -0.3
113,613 - Ac3H11_830 0.21 -0.2
113,613 - Ac3H11_830 0.21 +0.6
113,613 - Ac3H11_830 0.21 +0.5
113,613 - Ac3H11_830 0.21 -0.0
113,613 - Ac3H11_830 0.21 +0.6
113,613 - Ac3H11_830 0.21 -1.4
113,613 - Ac3H11_830 0.21 +0.1
113,613 - Ac3H11_830 0.21 +1.6
113,613 - Ac3H11_830 0.21 -0.0
113,613 - Ac3H11_830 0.21 +0.1
113,909 + Ac3H11_830 0.45 -1.0
113,909 + Ac3H11_830 0.45 -0.5
113,910 - Ac3H11_830 0.45 -0.2
113,910 - Ac3H11_830 0.45 -0.8
114,083 + Ac3H11_830 0.59 +0.3
114,107 + Ac3H11_830 0.61 +1.1
114,107 + Ac3H11_830 0.61 +0.4
114,107 + Ac3H11_830 0.61 +0.0
114,107 + Ac3H11_830 0.61 -0.2
114,108 - Ac3H11_830 0.61 +0.7
114,108 - Ac3H11_830 0.61 +0.5
114,108 - Ac3H11_830 0.61 +0.8
114,108 - Ac3H11_830 0.61 -0.0
114,108 - Ac3H11_830 0.61 -1.0
114,108 - Ac3H11_830 0.61 -0.3
114,108 - Ac3H11_830 0.61 +0.6
114,108 - Ac3H11_830 0.61 +0.3

Or see this region's nucleotide sequence