Experiment: sodium fluoride 35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4 and Ac3H11_5 are separated by 261 nucleotides
Ac3H11_4 - Phosphohydrolase (MutT/nudix family protein), at 3,009 to 3,647
_4
Ac3H11_5 - putative inner membrane protein, at 3,909 to 4,664
_5
Position (kb) 3
4
5 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 3.117 kb on + strand, within Ac3H11_4 at 3.117 kb on + strand, within Ac3H11_4 at 3.117 kb on + strand, within Ac3H11_4 at 3.117 kb on + strand, within Ac3H11_4 at 3.117 kb on + strand, within Ac3H11_4 at 3.118 kb on - strand, within Ac3H11_4 at 3.603 kb on + strand at 3.604 kb on - strand at 3.642 kb on + strand at 3.642 kb on + strand at 3.642 kb on + strand at 3.642 kb on + strand at 3.642 kb on + strand at 3.642 kb on + strand at 3.642 kb on + strand at 3.642 kb on + strand at 3.643 kb on - strand at 3.643 kb on - strand at 3.643 kb on - strand at 3.643 kb on - strand at 3.643 kb on - strand at 3.643 kb on - strand at 3.643 kb on - strand at 3.643 kb on - strand at 3.679 kb on + strand at 3.757 kb on + strand at 3.757 kb on + strand at 3.757 kb on + strand at 3.757 kb on + strand at 3.757 kb on + strand at 3.758 kb on - strand at 3.758 kb on - strand at 3.758 kb on - strand at 3.758 kb on - strand at 3.758 kb on - strand at 3.758 kb on - strand at 3.758 kb on - strand at 3.758 kb on - strand at 3.762 kb on - strand at 3.767 kb on + strand at 3.768 kb on - strand at 3.768 kb on - strand at 4.455 kb on + strand, within Ac3H11_5 at 4.456 kb on - strand, within Ac3H11_5 at 4.456 kb on - strand, within Ac3H11_5 at 4.551 kb on + strand, within Ac3H11_5 at 4.551 kb on + strand, within Ac3H11_5 at 4.551 kb on + strand, within Ac3H11_5 at 4.552 kb on - strand, within Ac3H11_5 at 4.552 kb on - strand, within Ac3H11_5 at 4.674 kb on + strand at 4.674 kb on + strand at 4.674 kb on + strand at 4.675 kb on - strand at 4.675 kb on - strand at 4.675 kb on - strand at 4.680 kb on + strand at 4.680 kb on + strand at 4.680 kb on + strand at 4.681 kb on - strand at 4.681 kb on - strand at 4.681 kb on - strand at 4.697 kb on + strand at 4.698 kb on - strand at 4.698 kb on - strand at 4.698 kb on - strand at 4.698 kb on - strand at 4.698 kb on - strand at 4.698 kb on - strand at 4.732 kb on + strand at 4.732 kb on + strand at 4.753 kb on + strand at 4.753 kb on + strand at 4.754 kb on - strand at 4.754 kb on - strand at 4.833 kb on - strand at 4.833 kb on - strand at 4.847 kb on + strand at 4.847 kb on + strand at 4.876 kb on + strand at 4.876 kb on + strand at 4.876 kb on + strand at 4.876 kb on + strand at 4.876 kb on + strand at 4.876 kb on + strand at 4.876 kb on + strand at 4.876 kb on + strand at 4.876 kb on + strand at 4.877 kb on - strand at 4.877 kb on - strand at 4.877 kb on - strand at 4.877 kb on - strand at 4.877 kb on - strand at 4.879 kb on + strand at 4.940 kb on + strand at 4.941 kb on - strand at 4.941 kb on - strand at 4.941 kb on - strand at 4.941 kb on - strand at 4.941 kb on - strand at 4.998 kb on + strand at 4.998 kb on + strand at 4.998 kb on + strand at 4.998 kb on + strand at 4.998 kb on + strand at 4.998 kb on + strand at 4.998 kb on + strand at 4.998 kb on + strand at 4.998 kb on + strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 4.999 kb on - strand at 5.002 kb on + strand at 5.002 kb on + strand at 5.002 kb on + strand at 5.002 kb on + strand at 5.002 kb on + strand at 5.003 kb on - strand at 5.003 kb on - strand at 5.003 kb on - strand at 5.003 kb on - strand at 5.003 kb on - strand at 5.003 kb on - strand at 5.003 kb on - strand at 5.003 kb on - strand at 5.008 kb on + strand at 5.008 kb on + strand at 5.009 kb on - strand at 5.009 kb on - strand at 5.009 kb on - strand at 5.011 kb on + strand at 5.011 kb on + strand at 5.011 kb on + strand at 5.011 kb on + strand at 5.012 kb on - strand at 5.012 kb on - strand at 5.032 kb on + strand at 5.033 kb on - strand at 5.033 kb on - strand at 5.033 kb on - strand at 5.143 kb on + strand at 5.143 kb on + strand at 5.143 kb on + strand at 5.143 kb on + strand at 5.144 kb on - strand at 5.144 kb on - strand at 5.144 kb on - strand at 5.144 kb on - strand at 5.144 kb on - strand at 5.144 kb on - strand at 5.210 kb on + strand at 5.219 kb on + strand at 5.219 kb on + strand at 5.219 kb on + strand at 5.219 kb on + strand at 5.220 kb on - strand at 5.220 kb on - strand at 5.244 kb on - strand at 5.244 kb on - strand at 5.244 kb on - strand at 5.244 kb on - strand at 5.332 kb on + strand at 5.332 kb on + strand at 5.332 kb on + strand at 5.332 kb on + strand at 5.333 kb on - strand at 5.333 kb on - strand at 5.333 kb on - strand at 5.333 kb on - strand at 5.340 kb on + strand at 5.341 kb on - strand at 5.341 kb on - strand at 5.373 kb on + strand at 5.373 kb on + strand at 5.373 kb on + strand at 5.373 kb on + strand at 5.374 kb on - strand at 5.374 kb on - strand at 5.374 kb on - strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.385 kb on - strand at 5.385 kb on - strand at 5.385 kb on - strand at 5.385 kb on - strand at 5.585 kb on + strand at 5.585 kb on + strand at 5.585 kb on + strand at 5.585 kb on + strand at 5.586 kb on - strand at 5.586 kb on - strand at 5.586 kb on - strand at 5.586 kb on - strand at 5.609 kb on + strand at 5.609 kb on + strand at 5.609 kb on + strand at 5.609 kb on + strand at 5.609 kb on + strand at 5.610 kb on - strand at 5.610 kb on - strand at 5.610 kb on - strand at 5.610 kb on - strand at 5.645 kb on + strand at 5.645 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 35 mM remove 3,117 + Ac3H11_4 0.17 +0.3 3,117 + Ac3H11_4 0.17 -0.0 3,117 + Ac3H11_4 0.17 -0.4 3,117 + Ac3H11_4 0.17 -0.3 3,117 + Ac3H11_4 0.17 -0.0 3,118 - Ac3H11_4 0.17 -0.1 3,603 + -1.2 3,604 - +0.9 3,642 + -0.0 3,642 + -0.3 3,642 + +1.1 3,642 + +0.2 3,642 + +1.3 3,642 + -0.1 3,642 + -0.1 3,642 + +0.4 3,643 - +0.1 3,643 - +0.0 3,643 - +0.8 3,643 - -0.9 3,643 - +0.7 3,643 - -0.4 3,643 - +0.7 3,643 - +0.6 3,679 + -0.6 3,757 + +0.2 3,757 + +0.8 3,757 + +1.5 3,757 + -0.5 3,757 + -0.2 3,758 - -0.4 3,758 - -0.3 3,758 - -0.5 3,758 - +0.6 3,758 - +0.9 3,758 - +0.2 3,758 - +1.0 3,758 - +0.6 3,762 - +1.2 3,767 + +0.3 3,768 - +0.2 3,768 - -0.7 4,455 + Ac3H11_5 0.72 +0.2 4,456 - Ac3H11_5 0.72 +0.5 4,456 - Ac3H11_5 0.72 -0.1 4,551 + Ac3H11_5 0.85 +1.0 4,551 + Ac3H11_5 0.85 +0.6 4,551 + Ac3H11_5 0.85 +1.2 4,552 - Ac3H11_5 0.85 -0.3 4,552 - Ac3H11_5 0.85 -0.1 4,674 + -0.5 4,674 + +0.2 4,674 + +1.0 4,675 - +0.2 4,675 - +0.1 4,675 - -1.2 4,680 + +0.2 4,680 + -0.2 4,680 + -1.0 4,681 - -0.4 4,681 - +0.1 4,681 - -1.2 4,697 + +1.3 4,698 - +0.3 4,698 - +0.0 4,698 - -0.3 4,698 - +0.1 4,698 - +0.1 4,698 - +0.2 4,732 + -1.2 4,732 + +0.2 4,753 + -2.2 4,753 + -0.1 4,754 - -0.3 4,754 - +1.3 4,833 - +0.1 4,833 - -3.5 4,847 + +0.5 4,847 + +0.1 4,876 + +0.7 4,876 + -0.6 4,876 + -0.3 4,876 + -0.5 4,876 + +0.3 4,876 + -0.1 4,876 + +0.1 4,876 + -0.5 4,876 + -1.2 4,877 - -1.1 4,877 - +0.2 4,877 - +0.6 4,877 - -0.5 4,877 - -0.1 4,879 + +0.9 4,940 + +0.0 4,941 - -0.1 4,941 - -0.1 4,941 - -0.9 4,941 - -0.4 4,941 - +0.4 4,998 + +0.8 4,998 + -0.5 4,998 + -0.6 4,998 + +0.5 4,998 + +0.1 4,998 + +0.5 4,998 + +0.7 4,998 + +1.0 4,998 + +1.5 4,999 - -0.1 4,999 - +0.5 4,999 - -0.7 4,999 - -0.3 4,999 - +0.6 4,999 - -1.2 4,999 - +1.0 4,999 - +0.6 4,999 - +1.0 4,999 - -0.1 4,999 - +0.3 4,999 - -0.1 4,999 - +0.2 4,999 - -0.4 5,002 + +2.1 5,002 + -0.6 5,002 + +0.7 5,002 + -0.2 5,002 + -0.2 5,003 - +0.2 5,003 - +1.5 5,003 - +0.1 5,003 - +0.1 5,003 - +0.3 5,003 - +0.7 5,003 - +0.1 5,003 - -0.0 5,008 + -0.1 5,008 + +0.4 5,009 - -0.2 5,009 - -0.0 5,009 - +0.0 5,011 + -0.4 5,011 + -1.1 5,011 + -0.2 5,011 + -1.1 5,012 - +0.1 5,012 - -0.8 5,032 + +0.7 5,033 - -0.4 5,033 - -0.9 5,033 - -0.3 5,143 + -0.2 5,143 + -1.5 5,143 + +0.2 5,143 + -1.1 5,144 - -0.7 5,144 - +0.2 5,144 - +0.6 5,144 - +0.4 5,144 - -0.2 5,144 - +1.4 5,210 + +0.6 5,219 + +0.5 5,219 + +0.3 5,219 + +0.5 5,219 + -0.9 5,220 - -0.9 5,220 - -0.4 5,244 - +0.6 5,244 - +0.6 5,244 - +0.2 5,244 - -0.8 5,332 + +0.1 5,332 + -0.2 5,332 + +0.3 5,332 + +0.2 5,333 - +0.4 5,333 - +0.9 5,333 - -0.3 5,333 - -0.1 5,340 + -1.2 5,341 - +0.8 5,341 - -1.5 5,373 + +0.1 5,373 + +0.0 5,373 + +0.8 5,373 + -0.2 5,374 - -0.2 5,374 - -0.1 5,374 - -0.1 5,384 + +0.2 5,384 + +0.8 5,384 + -1.9 5,384 + -0.2 5,385 - -0.6 5,385 - -0.7 5,385 - -0.5 5,385 - +0.1 5,585 + +0.6 5,585 + -1.7 5,585 + +0.7 5,585 + -0.0 5,586 - +1.2 5,586 - +1.2 5,586 - +0.6 5,586 - -0.7 5,609 + +0.1 5,609 + +0.1 5,609 + -0.6 5,609 + +0.4 5,609 + -1.9 5,610 - -0.2 5,610 - -0.0 5,610 - -0.2 5,610 - +0.2 5,645 + -1.3 5,645 + +0.3
Or see this region's nucleotide sequence