Experiment: sodium fluoride 35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4593 and Ac3H11_4594 are separated by 74 nucleotides Ac3H11_4594 and Ac3H11_4595 are separated by 38 nucleotides Ac3H11_4595 and Ac3H11_4596 are separated by 200 nucleotides
Ac3H11_4593 - hypothetical protein, at 194,996 to 195,289
_4593
Ac3H11_4594 - hypothetical protein, at 195,364 to 195,705
_4594
Ac3H11_4595 - Copper tolerance protein, at 195,744 to 196,064
_4595
Ac3H11_4596 - Multicopper oxidase, at 196,265 to 197,677
_4596
Position (kb) 195
196
197 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 194.763 kb on + strand at 194.763 kb on + strand at 194.764 kb on - strand at 194.764 kb on - strand at 194.764 kb on - strand at 194.764 kb on - strand at 194.873 kb on + strand at 194.873 kb on + strand at 194.873 kb on + strand at 194.873 kb on + strand at 194.873 kb on + strand at 194.874 kb on - strand at 194.874 kb on - strand at 194.874 kb on - strand at 194.901 kb on + strand at 194.902 kb on - strand at 194.902 kb on - strand at 194.913 kb on + strand at 194.913 kb on + strand at 194.913 kb on + strand at 194.914 kb on - strand at 194.914 kb on - strand at 194.958 kb on + strand at 194.998 kb on - strand at 194.998 kb on - strand at 194.998 kb on - strand at 194.998 kb on - strand at 195.002 kb on - strand at 195.002 kb on - strand at 195.002 kb on - strand at 195.205 kb on + strand, within Ac3H11_4593 at 195.205 kb on + strand, within Ac3H11_4593 at 195.205 kb on + strand, within Ac3H11_4593 at 195.205 kb on + strand, within Ac3H11_4593 at 195.206 kb on - strand, within Ac3H11_4593 at 195.206 kb on - strand, within Ac3H11_4593 at 195.206 kb on - strand, within Ac3H11_4593 at 195.207 kb on + strand, within Ac3H11_4593 at 195.207 kb on + strand, within Ac3H11_4593 at 195.208 kb on - strand, within Ac3H11_4593 at 195.208 kb on - strand, within Ac3H11_4593 at 195.208 kb on - strand, within Ac3H11_4593 at 195.274 kb on + strand at 195.274 kb on + strand at 195.275 kb on - strand at 195.275 kb on - strand at 195.275 kb on - strand at 195.303 kb on + strand at 195.303 kb on + strand at 195.303 kb on + strand at 195.303 kb on + strand at 195.303 kb on + strand at 195.304 kb on - strand at 195.304 kb on - strand at 195.304 kb on - strand at 195.313 kb on + strand at 195.313 kb on + strand at 195.313 kb on + strand at 195.313 kb on + strand at 195.313 kb on + strand at 195.314 kb on - strand at 195.314 kb on - strand at 195.314 kb on - strand at 195.359 kb on + strand at 195.359 kb on + strand at 195.359 kb on + strand at 195.359 kb on + strand at 195.360 kb on - strand at 195.360 kb on - strand at 195.365 kb on + strand at 195.365 kb on + strand at 195.365 kb on + strand at 195.366 kb on - strand at 195.366 kb on - strand at 195.366 kb on - strand at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.506 kb on - strand, within Ac3H11_4594 at 195.506 kb on - strand, within Ac3H11_4594 at 195.506 kb on - strand, within Ac3H11_4594 at 195.506 kb on - strand, within Ac3H11_4594 at 195.565 kb on + strand, within Ac3H11_4594 at 195.565 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.583 kb on - strand, within Ac3H11_4594 at 195.583 kb on - strand, within Ac3H11_4594 at 195.583 kb on - strand, within Ac3H11_4594 at 195.705 kb on + strand at 195.705 kb on + strand at 195.705 kb on + strand at 195.728 kb on + strand at 195.728 kb on + strand at 195.728 kb on + strand at 195.729 kb on - strand at 195.729 kb on - strand at 195.729 kb on - strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.746 kb on - strand at 195.746 kb on - strand at 195.746 kb on - strand at 195.746 kb on - strand at 195.746 kb on - strand at 195.928 kb on + strand, within Ac3H11_4595 at 195.928 kb on + strand, within Ac3H11_4595 at 195.928 kb on + strand, within Ac3H11_4595 at 195.928 kb on + strand, within Ac3H11_4595 at 195.992 kb on + strand, within Ac3H11_4595 at 195.992 kb on + strand, within Ac3H11_4595 at 195.992 kb on + strand, within Ac3H11_4595 at 195.996 kb on + strand, within Ac3H11_4595 at 195.996 kb on + strand, within Ac3H11_4595 at 195.996 kb on + strand, within Ac3H11_4595 at 195.997 kb on - strand, within Ac3H11_4595 at 195.997 kb on - strand, within Ac3H11_4595 at 196.007 kb on + strand, within Ac3H11_4595 at 196.008 kb on - strand, within Ac3H11_4595 at 196.008 kb on - strand, within Ac3H11_4595 at 196.087 kb on - strand at 196.087 kb on - strand at 196.100 kb on + strand at 196.101 kb on - strand at 196.113 kb on + strand at 196.114 kb on - strand at 196.114 kb on - strand at 196.114 kb on - strand at 196.114 kb on - strand at 196.114 kb on - strand at 196.158 kb on - strand at 196.173 kb on - strand at 196.173 kb on - strand at 196.173 kb on - strand at 196.229 kb on + strand at 196.229 kb on + strand at 196.229 kb on + strand at 196.229 kb on + strand at 196.230 kb on - strand at 196.230 kb on - strand at 196.230 kb on - strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.393 kb on - strand at 196.398 kb on + strand at 196.399 kb on - strand at 196.425 kb on + strand, within Ac3H11_4596 at 196.426 kb on - strand, within Ac3H11_4596 at 196.426 kb on - strand, within Ac3H11_4596 at 196.469 kb on + strand, within Ac3H11_4596 at 196.608 kb on + strand, within Ac3H11_4596 at 196.608 kb on + strand, within Ac3H11_4596 at 196.800 kb on + strand, within Ac3H11_4596 at 196.800 kb on + strand, within Ac3H11_4596 at 196.800 kb on + strand, within Ac3H11_4596 at 196.800 kb on + strand, within Ac3H11_4596 at 196.801 kb on - strand, within Ac3H11_4596 at 196.801 kb on - strand, within Ac3H11_4596
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 35 mM remove 194,763 + -0.6 194,763 + +0.0 194,764 - -0.9 194,764 - +0.4 194,764 - -0.1 194,764 - -0.9 194,873 + +0.5 194,873 + -0.2 194,873 + +0.3 194,873 + -0.7 194,873 + -0.5 194,874 - -0.0 194,874 - +0.3 194,874 - -0.4 194,901 + +0.1 194,902 - +0.7 194,902 - -1.2 194,913 + -0.6 194,913 + +0.3 194,913 + +0.4 194,914 - -0.1 194,914 - +0.6 194,958 + -1.2 194,998 - +0.1 194,998 - +0.9 194,998 - +0.3 194,998 - -2.1 195,002 - +0.3 195,002 - +0.2 195,002 - +0.2 195,205 + Ac3H11_4593 0.71 +0.1 195,205 + Ac3H11_4593 0.71 +0.0 195,205 + Ac3H11_4593 0.71 -0.4 195,205 + Ac3H11_4593 0.71 -0.4 195,206 - Ac3H11_4593 0.71 -0.6 195,206 - Ac3H11_4593 0.71 +0.1 195,206 - Ac3H11_4593 0.71 -0.9 195,207 + Ac3H11_4593 0.72 +0.6 195,207 + Ac3H11_4593 0.72 -0.0 195,208 - Ac3H11_4593 0.72 -0.8 195,208 - Ac3H11_4593 0.72 +1.6 195,208 - Ac3H11_4593 0.72 -1.2 195,274 + -0.6 195,274 + +1.4 195,275 - +0.8 195,275 - +0.7 195,275 - +0.9 195,303 + +0.9 195,303 + +0.1 195,303 + +1.2 195,303 + +1.0 195,303 + +0.1 195,304 - +0.3 195,304 - +0.5 195,304 - +0.6 195,313 + +0.5 195,313 + -0.2 195,313 + -0.2 195,313 + -0.4 195,313 + +0.5 195,314 - -0.8 195,314 - +0.1 195,314 - -0.4 195,359 + -1.5 195,359 + +0.6 195,359 + -0.9 195,359 + +0.5 195,360 - -1.2 195,360 - -0.1 195,365 + -0.2 195,365 + -0.0 195,365 + -0.2 195,366 - +0.3 195,366 - -0.3 195,366 - -1.4 195,505 + Ac3H11_4594 0.41 -0.1 195,505 + Ac3H11_4594 0.41 +0.3 195,505 + Ac3H11_4594 0.41 +0.2 195,505 + Ac3H11_4594 0.41 -0.6 195,505 + Ac3H11_4594 0.41 +0.0 195,505 + Ac3H11_4594 0.41 +0.4 195,505 + Ac3H11_4594 0.41 +0.3 195,505 + Ac3H11_4594 0.41 -0.7 195,505 + Ac3H11_4594 0.41 -0.1 195,506 - Ac3H11_4594 0.42 -1.3 195,506 - Ac3H11_4594 0.42 -1.5 195,506 - Ac3H11_4594 0.42 +1.3 195,506 - Ac3H11_4594 0.42 -0.4 195,565 + Ac3H11_4594 0.59 +0.6 195,565 + Ac3H11_4594 0.59 -0.4 195,582 + Ac3H11_4594 0.64 -1.0 195,582 + Ac3H11_4594 0.64 +0.7 195,582 + Ac3H11_4594 0.64 -1.0 195,582 + Ac3H11_4594 0.64 +0.4 195,582 + Ac3H11_4594 0.64 +0.3 195,582 + Ac3H11_4594 0.64 -0.2 195,582 + Ac3H11_4594 0.64 +0.4 195,582 + Ac3H11_4594 0.64 +0.9 195,583 - Ac3H11_4594 0.64 -0.4 195,583 - Ac3H11_4594 0.64 +0.1 195,583 - Ac3H11_4594 0.64 +0.5 195,705 + -0.6 195,705 + +0.6 195,705 + -0.6 195,728 + +0.5 195,728 + -0.4 195,728 + -0.5 195,729 - +0.5 195,729 - +0.8 195,729 - +2.6 195,745 + +0.7 195,745 + +0.6 195,745 + -0.5 195,745 + +0.2 195,745 + +0.3 195,745 + +0.5 195,745 + -0.1 195,746 - -0.1 195,746 - -1.0 195,746 - -0.1 195,746 - -0.4 195,746 - -0.6 195,928 + Ac3H11_4595 0.57 +0.1 195,928 + Ac3H11_4595 0.57 -0.7 195,928 + Ac3H11_4595 0.57 +0.0 195,928 + Ac3H11_4595 0.57 +0.1 195,992 + Ac3H11_4595 0.77 +0.0 195,992 + Ac3H11_4595 0.77 +0.3 195,992 + Ac3H11_4595 0.77 -0.1 195,996 + Ac3H11_4595 0.79 +0.7 195,996 + Ac3H11_4595 0.79 +0.0 195,996 + Ac3H11_4595 0.79 +0.2 195,997 - Ac3H11_4595 0.79 +0.2 195,997 - Ac3H11_4595 0.79 +0.3 196,007 + Ac3H11_4595 0.82 +0.4 196,008 - Ac3H11_4595 0.82 -0.7 196,008 - Ac3H11_4595 0.82 -0.7 196,087 - -1.0 196,087 - -2.0 196,100 + +0.1 196,101 - +0.4 196,113 + -0.6 196,114 - -3.3 196,114 - -1.8 196,114 - +1.1 196,114 - +0.9 196,114 - -1.1 196,158 - -0.2 196,173 - -0.4 196,173 - -0.6 196,173 - -0.5 196,229 + +1.3 196,229 + +0.2 196,229 + -1.8 196,229 + -0.2 196,230 - +0.4 196,230 - -0.2 196,230 - -0.9 196,233 + +0.4 196,233 + -0.5 196,233 + +0.5 196,233 + +0.8 196,233 + +0.1 196,233 + -0.4 196,234 - -0.9 196,234 - -0.7 196,234 - -0.1 196,234 - -0.6 196,234 - -0.5 196,234 - +0.0 196,234 - +1.1 196,234 - +0.4 196,234 - +0.2 196,238 + +0.3 196,238 + +0.1 196,238 + +0.1 196,238 + +0.5 196,238 + -1.3 196,238 + -0.2 196,239 - +0.3 196,239 - -1.5 196,239 - +0.2 196,239 - -0.5 196,239 - -0.2 196,239 - +0.0 196,239 - -0.1 196,239 - +1.6 196,393 - -0.1 196,398 + -0.7 196,399 - +0.1 196,425 + Ac3H11_4596 0.11 -0.3 196,426 - Ac3H11_4596 0.11 -0.5 196,426 - Ac3H11_4596 0.11 +0.1 196,469 + Ac3H11_4596 0.14 +0.4 196,608 + Ac3H11_4596 0.24 -0.4 196,608 + Ac3H11_4596 0.24 +0.9 196,800 + Ac3H11_4596 0.38 -0.8 196,800 + Ac3H11_4596 0.38 +0.7 196,800 + Ac3H11_4596 0.38 +0.5 196,800 + Ac3H11_4596 0.38 -0.2 196,801 - Ac3H11_4596 0.38 -1.1 196,801 - Ac3H11_4596 0.38 +0.5
Or see this region's nucleotide sequence