Experiment: sodium fluoride 35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3416 and Ac3H11_3417 are separated by 152 nucleotides Ac3H11_3417 and Ac3H11_3418 are separated by 414 nucleotides
Ac3H11_3416 - P-hydroxybenzoate hydroxylase (EC 1.14.13.2), at 100,401 to 100,544
_3416
Ac3H11_3417 - hypothetical protein, at 100,697 to 100,858
_3417
Ac3H11_3418 - P-hydroxybenzoate hydroxylase (EC 1.14.13.2), at 101,273 to 102,475
_3418
Position (kb) 100
101 Strain fitness (log2 ratio) -2
-1
0
1
2 at 99.697 kb on - strand at 99.813 kb on + strand at 99.813 kb on + strand at 99.813 kb on + strand at 99.813 kb on + strand at 99.813 kb on + strand at 99.813 kb on + strand at 99.814 kb on - strand at 99.814 kb on - strand at 99.886 kb on + strand at 99.886 kb on + strand at 99.886 kb on + strand at 99.913 kb on + strand at 99.914 kb on - strand at 99.914 kb on - strand at 99.914 kb on - strand at 99.992 kb on + strand at 99.992 kb on + strand at 99.992 kb on + strand at 99.992 kb on + strand at 99.992 kb on + strand at 99.993 kb on - strand at 99.993 kb on - strand at 100.017 kb on + strand at 100.061 kb on + strand at 100.098 kb on + strand at 100.098 kb on + strand at 100.098 kb on + strand at 100.105 kb on + strand at 100.105 kb on + strand at 100.105 kb on + strand at 100.105 kb on + strand at 100.106 kb on - strand at 100.106 kb on - strand at 100.106 kb on - strand at 100.124 kb on + strand at 100.124 kb on + strand at 100.125 kb on - strand at 100.125 kb on - strand at 100.201 kb on + strand at 100.201 kb on + strand at 100.263 kb on + strand at 100.263 kb on + strand at 100.263 kb on + strand at 100.264 kb on - strand at 100.264 kb on - strand at 100.264 kb on - strand at 100.264 kb on - strand at 100.264 kb on - strand at 100.265 kb on + strand at 100.266 kb on - strand at 100.314 kb on + strand at 100.315 kb on - strand at 100.315 kb on - strand at 100.320 kb on + strand at 100.341 kb on + strand at 100.342 kb on - strand at 100.372 kb on - strand at 100.440 kb on + strand, within Ac3H11_3416 at 100.441 kb on - strand, within Ac3H11_3416 at 100.465 kb on + strand, within Ac3H11_3416 at 100.465 kb on + strand, within Ac3H11_3416 at 100.465 kb on + strand, within Ac3H11_3416 at 100.499 kb on - strand, within Ac3H11_3416 at 100.655 kb on - strand at 100.655 kb on - strand at 100.655 kb on - strand at 100.814 kb on + strand, within Ac3H11_3417 at 100.884 kb on + strand at 100.885 kb on - strand at 100.885 kb on - strand at 101.031 kb on + strand at 101.031 kb on + strand at 101.031 kb on + strand at 101.031 kb on + strand at 101.060 kb on - strand at 101.120 kb on + strand at 101.121 kb on - strand at 101.145 kb on - strand at 101.260 kb on + strand at 101.260 kb on + strand at 101.292 kb on + strand at 101.292 kb on + strand at 101.293 kb on - strand at 101.293 kb on - strand at 101.293 kb on - strand at 101.337 kb on + strand at 101.370 kb on + strand at 101.371 kb on - strand at 101.464 kb on - strand, within Ac3H11_3418 at 101.524 kb on - strand, within Ac3H11_3418 at 101.524 kb on - strand, within Ac3H11_3418 at 101.526 kb on + strand, within Ac3H11_3418 at 101.526 kb on + strand, within Ac3H11_3418 at 101.526 kb on + strand, within Ac3H11_3418 at 101.526 kb on + strand, within Ac3H11_3418 at 101.526 kb on + strand, within Ac3H11_3418 at 101.526 kb on + strand, within Ac3H11_3418 at 101.527 kb on - strand, within Ac3H11_3418 at 101.527 kb on - strand, within Ac3H11_3418 at 101.527 kb on - strand, within Ac3H11_3418 at 101.527 kb on - strand, within Ac3H11_3418 at 101.527 kb on - strand, within Ac3H11_3418 at 101.527 kb on - strand, within Ac3H11_3418 at 101.527 kb on - strand, within Ac3H11_3418 at 101.781 kb on + strand, within Ac3H11_3418 at 101.781 kb on + strand, within Ac3H11_3418 at 101.782 kb on - strand, within Ac3H11_3418 at 101.782 kb on - strand, within Ac3H11_3418 at 101.782 kb on - strand, within Ac3H11_3418 at 101.782 kb on - strand, within Ac3H11_3418 at 101.784 kb on + strand, within Ac3H11_3418 at 101.844 kb on + strand, within Ac3H11_3418 at 101.845 kb on - strand, within Ac3H11_3418
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 35 mM remove 99,697 - -1.3 99,813 + -0.6 99,813 + -1.0 99,813 + +0.1 99,813 + -0.4 99,813 + -0.2 99,813 + +0.3 99,814 - +0.7 99,814 - -0.1 99,886 + -0.1 99,886 + -0.5 99,886 + -1.1 99,913 + -0.2 99,914 - -0.5 99,914 - -1.2 99,914 - -0.9 99,992 + -0.1 99,992 + +0.8 99,992 + +0.9 99,992 + +0.7 99,992 + +1.2 99,993 - +1.2 99,993 - -0.9 100,017 + +0.1 100,061 + +0.1 100,098 + +0.0 100,098 + +0.2 100,098 + +0.1 100,105 + -0.9 100,105 + +0.9 100,105 + -0.6 100,105 + -0.3 100,106 - +1.3 100,106 - +1.1 100,106 - +0.4 100,124 + +0.4 100,124 + +0.2 100,125 - +0.4 100,125 - -0.0 100,201 + -0.3 100,201 + +0.0 100,263 + +0.4 100,263 + +0.7 100,263 + -0.0 100,264 - -0.2 100,264 - -0.5 100,264 - +0.8 100,264 - +0.5 100,264 - +1.2 100,265 + +0.3 100,266 - -0.4 100,314 + -0.1 100,315 - -0.3 100,315 - +0.2 100,320 + -2.6 100,341 + +0.6 100,342 - +0.7 100,372 - +0.1 100,440 + Ac3H11_3416 0.27 +1.1 100,441 - Ac3H11_3416 0.28 -0.5 100,465 + Ac3H11_3416 0.44 +0.5 100,465 + Ac3H11_3416 0.44 -0.0 100,465 + Ac3H11_3416 0.44 -0.5 100,499 - Ac3H11_3416 0.68 +0.1 100,655 - -0.3 100,655 - +0.1 100,655 - -0.4 100,814 + Ac3H11_3417 0.72 +0.6 100,884 + +0.1 100,885 - -0.3 100,885 - +0.4 101,031 + -0.6 101,031 + -0.1 101,031 + -0.5 101,031 + +0.3 101,060 - +1.5 101,120 + -0.2 101,121 - +0.2 101,145 - +0.2 101,260 + +0.4 101,260 + -1.8 101,292 + -0.2 101,292 + -0.2 101,293 - -1.3 101,293 - +0.0 101,293 - +0.5 101,337 + +0.7 101,370 + -0.7 101,371 - -0.0 101,464 - Ac3H11_3418 0.16 -0.3 101,524 - Ac3H11_3418 0.21 +2.3 101,524 - Ac3H11_3418 0.21 -0.1 101,526 + Ac3H11_3418 0.21 -0.4 101,526 + Ac3H11_3418 0.21 +0.3 101,526 + Ac3H11_3418 0.21 -1.4 101,526 + Ac3H11_3418 0.21 -0.3 101,526 + Ac3H11_3418 0.21 +0.5 101,526 + Ac3H11_3418 0.21 +0.1 101,527 - Ac3H11_3418 0.21 -0.1 101,527 - Ac3H11_3418 0.21 -0.3 101,527 - Ac3H11_3418 0.21 -0.6 101,527 - Ac3H11_3418 0.21 -0.3 101,527 - Ac3H11_3418 0.21 -0.0 101,527 - Ac3H11_3418 0.21 +0.4 101,527 - Ac3H11_3418 0.21 +1.1 101,781 + Ac3H11_3418 0.42 +0.8 101,781 + Ac3H11_3418 0.42 +0.9 101,782 - Ac3H11_3418 0.42 +0.2 101,782 - Ac3H11_3418 0.42 +0.6 101,782 - Ac3H11_3418 0.42 +0.1 101,782 - Ac3H11_3418 0.42 +0.1 101,784 + Ac3H11_3418 0.42 +0.5 101,844 + Ac3H11_3418 0.47 -1.5 101,845 - Ac3H11_3418 0.48 -0.7
Or see this region's nucleotide sequence