Experiment: sodium fluoride 35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2441 and Ac3H11_2442 overlap by 4 nucleotides Ac3H11_2442 and Ac3H11_2443 are separated by 19 nucleotides Ac3H11_2443 and Ac3H11_2444 are separated by 87 nucleotides
Ac3H11_2441 - FIG00933224: hypothetical protein, at 700,343 to 701,110
_2441
Ac3H11_2442 - FIG00349562: hypothetical protein, at 701,107 to 701,682
_2442
Ac3H11_2443 - heat shock protein DnaJ domain protein, at 701,702 to 701,989
_2443
Ac3H11_2444 - FIG000859: hypothetical protein, at 702,077 to 702,790
_2444
Position (kb) 701
702 Strain fitness (log2 ratio) -2
-1
0
1 at 700.716 kb on + strand, within Ac3H11_2441 at 700.716 kb on + strand, within Ac3H11_2441 at 700.716 kb on + strand, within Ac3H11_2441 at 700.717 kb on - strand, within Ac3H11_2441 at 700.717 kb on - strand, within Ac3H11_2441 at 700.845 kb on + strand, within Ac3H11_2441 at 700.845 kb on + strand, within Ac3H11_2441 at 700.845 kb on + strand, within Ac3H11_2441 at 700.846 kb on - strand, within Ac3H11_2441 at 700.846 kb on - strand, within Ac3H11_2441 at 701.166 kb on + strand, within Ac3H11_2442 at 701.167 kb on - strand, within Ac3H11_2442 at 701.213 kb on + strand, within Ac3H11_2442 at 701.213 kb on + strand, within Ac3H11_2442 at 701.213 kb on + strand, within Ac3H11_2442 at 701.213 kb on + strand, within Ac3H11_2442 at 701.214 kb on - strand, within Ac3H11_2442 at 701.214 kb on - strand, within Ac3H11_2442 at 701.313 kb on - strand, within Ac3H11_2442 at 701.313 kb on - strand, within Ac3H11_2442 at 701.313 kb on - strand, within Ac3H11_2442 at 701.642 kb on + strand at 701.667 kb on - strand at 701.667 kb on - strand at 701.667 kb on - strand at 701.730 kb on + strand at 701.799 kb on + strand, within Ac3H11_2443 at 701.835 kb on + strand, within Ac3H11_2443 at 701.899 kb on - strand, within Ac3H11_2443 at 701.899 kb on - strand, within Ac3H11_2443 at 702.076 kb on - strand at 702.204 kb on + strand, within Ac3H11_2444 at 702.204 kb on + strand, within Ac3H11_2444 at 702.204 kb on + strand, within Ac3H11_2444 at 702.204 kb on + strand, within Ac3H11_2444 at 702.205 kb on - strand, within Ac3H11_2444 at 702.205 kb on - strand, within Ac3H11_2444 at 702.205 kb on - strand, within Ac3H11_2444 at 702.205 kb on - strand, within Ac3H11_2444 at 702.534 kb on + strand, within Ac3H11_2444 at 702.535 kb on - strand, within Ac3H11_2444 at 702.544 kb on - strand, within Ac3H11_2444 at 702.544 kb on - strand, within Ac3H11_2444 at 702.558 kb on + strand, within Ac3H11_2444 at 702.559 kb on - strand, within Ac3H11_2444 at 702.797 kb on + strand at 702.797 kb on + strand at 702.797 kb on + strand at 702.798 kb on - strand at 702.798 kb on - strand at 702.857 kb on + strand at 702.857 kb on + strand at 702.857 kb on + strand at 702.857 kb on + strand at 702.858 kb on - strand at 702.858 kb on - strand at 702.858 kb on - strand at 702.960 kb on + strand at 702.961 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 35 mM remove 700,716 + Ac3H11_2441 0.49 -0.9 700,716 + Ac3H11_2441 0.49 -0.0 700,716 + Ac3H11_2441 0.49 -0.7 700,717 - Ac3H11_2441 0.49 -0.3 700,717 - Ac3H11_2441 0.49 +0.6 700,845 + Ac3H11_2441 0.65 -0.1 700,845 + Ac3H11_2441 0.65 -0.7 700,845 + Ac3H11_2441 0.65 +0.5 700,846 - Ac3H11_2441 0.65 +0.1 700,846 - Ac3H11_2441 0.65 +0.3 701,166 + Ac3H11_2442 0.10 -0.3 701,167 - Ac3H11_2442 0.10 +0.0 701,213 + Ac3H11_2442 0.18 +0.3 701,213 + Ac3H11_2442 0.18 -0.6 701,213 + Ac3H11_2442 0.18 +0.0 701,213 + Ac3H11_2442 0.18 -1.9 701,214 - Ac3H11_2442 0.19 -1.5 701,214 - Ac3H11_2442 0.19 -0.2 701,313 - Ac3H11_2442 0.36 -0.5 701,313 - Ac3H11_2442 0.36 -0.5 701,313 - Ac3H11_2442 0.36 +0.2 701,642 + +0.0 701,667 - -0.1 701,667 - +0.2 701,667 - +0.6 701,730 + -0.4 701,799 + Ac3H11_2443 0.34 +0.9 701,835 + Ac3H11_2443 0.46 +0.3 701,899 - Ac3H11_2443 0.68 +0.9 701,899 - Ac3H11_2443 0.68 -0.4 702,076 - +1.1 702,204 + Ac3H11_2444 0.18 -0.5 702,204 + Ac3H11_2444 0.18 -0.8 702,204 + Ac3H11_2444 0.18 -0.0 702,204 + Ac3H11_2444 0.18 +0.2 702,205 - Ac3H11_2444 0.18 -1.4 702,205 - Ac3H11_2444 0.18 +0.2 702,205 - Ac3H11_2444 0.18 +1.3 702,205 - Ac3H11_2444 0.18 -0.0 702,534 + Ac3H11_2444 0.64 +0.6 702,535 - Ac3H11_2444 0.64 +0.5 702,544 - Ac3H11_2444 0.65 -2.7 702,544 - Ac3H11_2444 0.65 -0.3 702,558 + Ac3H11_2444 0.67 +0.5 702,559 - Ac3H11_2444 0.68 -0.1 702,797 + +0.2 702,797 + +0.3 702,797 + +0.1 702,798 - -0.6 702,798 - +0.1 702,857 + -2.0 702,857 + +0.1 702,857 + +0.6 702,857 + -1.0 702,858 - -0.4 702,858 - -0.9 702,858 - +0.5 702,960 + -1.4 702,961 - +0.5
Or see this region's nucleotide sequence