Experiment: sodium fluoride 35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2033 and Ac3H11_2034 are separated by 83 nucleotides Ac3H11_2034 and Ac3H11_2035 are separated by 143 nucleotides Ac3H11_2035 and Ac3H11_2036 are separated by 113 nucleotides
Ac3H11_2033 - General secretion pathway protein L, at 254,655 to 255,950
_2033
Ac3H11_2034 - General secretion pathway protein K, at 256,034 to 256,969
_2034
Ac3H11_2035 - General secretion pathway protein J, at 257,113 to 257,757
_2035
Ac3H11_2036 - General secretion pathway protein I, at 257,871 to 258,245
_2036
Position (kb) 256
257 Strain fitness (log2 ratio) -1
0
1
2 at 255.889 kb on + strand at 255.890 kb on - strand at 255.890 kb on - strand at 255.895 kb on + strand at 256.188 kb on + strand, within Ac3H11_2034 at 256.188 kb on + strand, within Ac3H11_2034 at 256.352 kb on - strand, within Ac3H11_2034 at 256.483 kb on + strand, within Ac3H11_2034 at 257.291 kb on + strand, within Ac3H11_2035 at 257.292 kb on - strand, within Ac3H11_2035 at 257.757 kb on + strand at 257.758 kb on - strand at 257.758 kb on - strand at 257.875 kb on + strand at 257.875 kb on + strand at 257.875 kb on + strand at 257.876 kb on - strand at 257.876 kb on - strand at 257.876 kb on - strand at 257.876 kb on - strand at 257.876 kb on - strand at 257.876 kb on - strand at 257.876 kb on - strand at 257.876 kb on - strand at 257.876 kb on - strand at 257.945 kb on + strand, within Ac3H11_2036 at 257.946 kb on - strand, within Ac3H11_2036
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 35 mM remove 255,889 + +1.8 255,890 - +1.2 255,890 - +1.8 255,895 + +1.1 256,188 + Ac3H11_2034 0.16 +0.7 256,188 + Ac3H11_2034 0.16 +2.0 256,352 - Ac3H11_2034 0.34 +1.7 256,483 + Ac3H11_2034 0.48 +0.9 257,291 + Ac3H11_2035 0.28 +1.5 257,292 - Ac3H11_2035 0.28 -0.6 257,757 + +1.0 257,758 - -0.1 257,758 - +1.5 257,875 + +1.0 257,875 + -0.6 257,875 + +0.4 257,876 - +1.4 257,876 - -0.5 257,876 - +0.9 257,876 - -0.1 257,876 - +0.7 257,876 - +0.7 257,876 - -0.6 257,876 - +0.3 257,876 - -0.3 257,945 + Ac3H11_2036 0.20 +1.4 257,946 - Ac3H11_2036 0.20 +1.6
Or see this region's nucleotide sequence