Experiment: sodium fluoride 35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_128 and Ac3H11_129 are separated by 496 nucleotides Ac3H11_129 and Ac3H11_130 are separated by 76 nucleotides Ac3H11_130 and Ac3H11_131 are separated by 126 nucleotides Ac3H11_131 and Ac3H11_132 are separated by 2 nucleotides
Ac3H11_128 - hypothetical protein, at 13,560 to 13,673
_128
Ac3H11_129 - hypothetical protein, at 14,170 to 14,457
_129
Ac3H11_130 - hypothetical protein, at 14,534 to 14,827
_130
Ac3H11_131 - Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5), at 14,954 to 15,592
_131
Ac3H11_132 - Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5), at 15,595 to 16,302
_132
Position (kb) 14
15 Strain fitness (log2 ratio) -2
-1
0
1
2 at 13.561 kb on + strand at 13.561 kb on + strand at 13.561 kb on + strand at 13.561 kb on + strand at 13.561 kb on + strand at 13.561 kb on + strand at 13.621 kb on + strand, within Ac3H11_128 at 13.621 kb on + strand, within Ac3H11_128 at 13.621 kb on + strand, within Ac3H11_128 at 13.622 kb on - strand, within Ac3H11_128 at 13.622 kb on - strand, within Ac3H11_128 at 13.693 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.703 kb on + strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.704 kb on - strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.705 kb on + strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.706 kb on - strand at 13.733 kb on + strand at 13.733 kb on + strand at 13.733 kb on + strand at 13.734 kb on - strand at 13.734 kb on - strand at 13.915 kb on + strand at 13.915 kb on + strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.916 kb on - strand at 13.955 kb on + strand at 14.002 kb on + strand at 14.003 kb on - strand at 14.003 kb on - strand at 14.003 kb on - strand at 14.003 kb on - strand at 14.044 kb on - strand at 14.044 kb on - strand at 14.151 kb on - strand at 14.368 kb on + strand, within Ac3H11_129 at 14.368 kb on + strand, within Ac3H11_129 at 14.368 kb on + strand, within Ac3H11_129 at 14.368 kb on + strand, within Ac3H11_129 at 14.368 kb on + strand, within Ac3H11_129 at 14.494 kb on + strand at 14.494 kb on + strand at 14.494 kb on + strand at 14.494 kb on + strand at 14.495 kb on - strand at 14.495 kb on - strand at 14.495 kb on - strand at 14.680 kb on + strand, within Ac3H11_130 at 14.732 kb on + strand, within Ac3H11_130 at 14.732 kb on + strand, within Ac3H11_130 at 14.732 kb on + strand, within Ac3H11_130 at 14.732 kb on + strand, within Ac3H11_130 at 14.732 kb on + strand, within Ac3H11_130 at 14.732 kb on + strand, within Ac3H11_130 at 14.825 kb on + strand at 14.946 kb on + strand at 14.946 kb on + strand at 14.946 kb on + strand at 14.946 kb on + strand at 14.946 kb on + strand at 14.946 kb on + strand at 14.946 kb on + strand at 14.947 kb on - strand at 14.947 kb on - strand at 14.947 kb on - strand at 14.947 kb on - strand at 14.947 kb on - strand at 14.947 kb on - strand at 14.955 kb on + strand at 14.955 kb on + strand at 14.956 kb on - strand at 14.956 kb on - strand at 14.968 kb on + strand at 15.531 kb on + strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.532 kb on - strand at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.674 kb on + strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132 at 15.675 kb on - strand, within Ac3H11_132
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 35 mM remove 13,561 + -0.9 13,561 + +0.7 13,561 + -0.2 13,561 + +0.2 13,561 + +0.3 13,561 + +0.4 13,621 + Ac3H11_128 0.54 +1.1 13,621 + Ac3H11_128 0.54 -1.0 13,621 + Ac3H11_128 0.54 +0.5 13,622 - Ac3H11_128 0.54 -0.5 13,622 - Ac3H11_128 0.54 -0.5 13,693 + +0.4 13,703 + +0.4 13,703 + +2.0 13,703 + +0.6 13,703 + +0.2 13,703 + +0.7 13,703 + +0.5 13,703 + +0.3 13,703 + -0.1 13,703 + +0.3 13,703 + -0.2 13,703 + -0.7 13,703 + -0.6 13,703 + -0.3 13,703 + -1.2 13,703 + +0.4 13,703 + -0.8 13,703 + -0.0 13,703 + -1.5 13,703 + -0.0 13,704 - -1.4 13,704 - -0.3 13,704 - -0.7 13,704 - -0.3 13,704 - +0.6 13,704 - +0.1 13,704 - -0.1 13,704 - +0.1 13,704 - -1.9 13,704 - -0.7 13,704 - +0.4 13,704 - +1.0 13,704 - -0.5 13,705 + +0.7 13,705 + -1.0 13,705 + -0.7 13,705 + -0.0 13,705 + +1.0 13,705 + -0.5 13,705 + +1.0 13,705 + -1.4 13,705 + +0.2 13,705 + -1.7 13,706 - -0.0 13,706 - +0.4 13,706 - +0.8 13,706 - -0.4 13,706 - +0.2 13,706 - +0.3 13,706 - -0.8 13,706 - -2.0 13,706 - -0.4 13,706 - +0.3 13,706 - +0.3 13,733 + +0.0 13,733 + +0.9 13,733 + -0.1 13,734 - +1.2 13,734 - +0.4 13,915 + -0.8 13,915 + -0.1 13,916 - +0.3 13,916 - +0.9 13,916 - +0.1 13,916 - -0.1 13,916 - +0.7 13,916 - +0.2 13,916 - +0.9 13,916 - -0.5 13,916 - -0.3 13,916 - -1.6 13,955 + +0.6 14,002 + +0.6 14,003 - -1.1 14,003 - -0.6 14,003 - +0.1 14,003 - -0.7 14,044 - -0.4 14,044 - +0.2 14,151 - -1.0 14,368 + Ac3H11_129 0.69 +0.3 14,368 + Ac3H11_129 0.69 +0.8 14,368 + Ac3H11_129 0.69 +0.0 14,368 + Ac3H11_129 0.69 -1.3 14,368 + Ac3H11_129 0.69 +0.6 14,494 + -0.1 14,494 + +0.7 14,494 + +0.0 14,494 + +0.0 14,495 - +0.0 14,495 - -0.5 14,495 - -1.1 14,680 + Ac3H11_130 0.50 -0.5 14,732 + Ac3H11_130 0.67 +0.8 14,732 + Ac3H11_130 0.67 +1.6 14,732 + Ac3H11_130 0.67 +0.2 14,732 + Ac3H11_130 0.67 +0.9 14,732 + Ac3H11_130 0.67 -0.3 14,732 + Ac3H11_130 0.67 -0.1 14,825 + -0.3 14,946 + -1.7 14,946 + +0.7 14,946 + -0.3 14,946 + -2.3 14,946 + -1.2 14,946 + -0.3 14,946 + +0.4 14,947 - +0.0 14,947 - -1.1 14,947 - -0.3 14,947 - -0.7 14,947 - -0.2 14,947 - +0.2 14,955 + -0.6 14,955 + -0.0 14,956 - -0.4 14,956 - +0.2 14,968 + -1.1 15,531 + +0.0 15,532 - -0.4 15,532 - -0.4 15,532 - -0.3 15,532 - -0.4 15,532 - -0.5 15,532 - +0.2 15,532 - +0.0 15,532 - -0.9 15,674 + Ac3H11_132 0.11 +0.4 15,674 + Ac3H11_132 0.11 -0.9 15,674 + Ac3H11_132 0.11 -0.3 15,674 + Ac3H11_132 0.11 -1.0 15,674 + Ac3H11_132 0.11 -0.2 15,674 + Ac3H11_132 0.11 -0.4 15,674 + Ac3H11_132 0.11 +0.2 15,674 + Ac3H11_132 0.11 +0.1 15,674 + Ac3H11_132 0.11 +2.0 15,674 + Ac3H11_132 0.11 +0.3 15,674 + Ac3H11_132 0.11 -1.9 15,674 + Ac3H11_132 0.11 -0.5 15,675 - Ac3H11_132 0.11 -0.0 15,675 - Ac3H11_132 0.11 +0.2 15,675 - Ac3H11_132 0.11 -0.2 15,675 - Ac3H11_132 0.11 -0.3 15,675 - Ac3H11_132 0.11 -0.2 15,675 - Ac3H11_132 0.11 -0.1 15,675 - Ac3H11_132 0.11 +0.0 15,675 - Ac3H11_132 0.11 +0.2 15,675 - Ac3H11_132 0.11 -0.7 15,675 - Ac3H11_132 0.11 -0.6 15,675 - Ac3H11_132 0.11 -0.9 15,675 - Ac3H11_132 0.11 -0.2 15,675 - Ac3H11_132 0.11 +0.9 15,675 - Ac3H11_132 0.11 -0.7 15,675 - Ac3H11_132 0.11 -0.1
Or see this region's nucleotide sequence