Experiment: sodium fluoride 35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1183 and Ac3H11_1184 are separated by 136 nucleotides Ac3H11_1184 and Ac3H11_1185 are separated by 88 nucleotides
Ac3H11_1183 - 4-oxalomesaconate hydratase (EC 4.2.1.83), at 20,712 to 21,746
_1183
Ac3H11_1184 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC 4.1.3.17), at 21,883 to 22,566
_1184
Ac3H11_1185 - putative exported protein, at 22,655 to 23,665
_1185
Position (kb)
21
22
23 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 21.120 kb on + strand, within Ac3H11_1183 at 21.210 kb on + strand, within Ac3H11_1183 at 21.211 kb on - strand, within Ac3H11_1183 at 21.228 kb on + strand, within Ac3H11_1183 at 21.405 kb on + strand, within Ac3H11_1183 at 21.406 kb on - strand, within Ac3H11_1183 at 21.501 kb on + strand, within Ac3H11_1183 at 21.612 kb on + strand, within Ac3H11_1183 at 21.613 kb on - strand, within Ac3H11_1183 at 21.613 kb on - strand, within Ac3H11_1183 at 21.613 kb on - strand, within Ac3H11_1183 at 21.616 kb on - strand, within Ac3H11_1183 at 21.634 kb on - strand, within Ac3H11_1183 at 21.634 kb on - strand, within Ac3H11_1183 at 21.634 kb on - strand, within Ac3H11_1183 at 21.681 kb on + strand at 21.682 kb on - strand at 21.682 kb on - strand at 21.886 kb on + strand at 21.887 kb on - strand at 21.887 kb on - strand at 21.887 kb on - strand at 21.893 kb on + strand at 21.893 kb on + strand at 21.894 kb on - strand at 22.165 kb on + strand, within Ac3H11_1184 at 22.166 kb on - strand, within Ac3H11_1184 at 22.516 kb on + strand at 22.516 kb on + strand at 22.516 kb on + strand at 22.516 kb on + strand at 22.517 kb on - strand at 22.517 kb on - strand at 22.517 kb on - strand at 22.517 kb on - strand at 22.517 kb on - strand at 22.517 kb on - strand at 22.608 kb on + strand at 22.609 kb on - strand at 23.015 kb on + strand, within Ac3H11_1185 at 23.097 kb on - strand, within Ac3H11_1185 at 23.097 kb on - strand, within Ac3H11_1185 at 23.153 kb on + strand, within Ac3H11_1185 at 23.154 kb on - strand, within Ac3H11_1185 at 23.154 kb on - strand, within Ac3H11_1185 at 23.261 kb on + strand, within Ac3H11_1185 at 23.261 kb on + strand, within Ac3H11_1185 at 23.327 kb on + strand, within Ac3H11_1185
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 35 mM remove 21,120 + Ac3H11_1183 0.39 -0.6 21,210 + Ac3H11_1183 0.48 -1.2 21,211 - Ac3H11_1183 0.48 -1.0 21,228 + Ac3H11_1183 0.50 -0.1 21,405 + Ac3H11_1183 0.67 -0.5 21,406 - Ac3H11_1183 0.67 -0.1 21,501 + Ac3H11_1183 0.76 +2.1 21,612 + Ac3H11_1183 0.87 -1.4 21,613 - Ac3H11_1183 0.87 +0.6 21,613 - Ac3H11_1183 0.87 -0.0 21,613 - Ac3H11_1183 0.87 +0.4 21,616 - Ac3H11_1183 0.87 -1.4 21,634 - Ac3H11_1183 0.89 -1.1 21,634 - Ac3H11_1183 0.89 +0.9 21,634 - Ac3H11_1183 0.89 +0.7 21,681 + -0.7 21,682 - -0.5 21,682 - -0.6 21,886 + -0.5 21,887 - -1.0 21,887 - -1.3 21,887 - -1.5 21,893 + -0.3 21,893 + -0.3 21,894 - -0.1 22,165 + Ac3H11_1184 0.41 +0.9 22,166 - Ac3H11_1184 0.41 +0.6 22,516 + -0.1 22,516 + -0.2 22,516 + +2.4 22,516 + -0.3 22,517 - +0.1 22,517 - -0.4 22,517 - +0.1 22,517 - +0.7 22,517 - -0.4 22,517 - +0.6 22,608 + -2.1 22,609 - -1.3 23,015 + Ac3H11_1185 0.36 +0.5 23,097 - Ac3H11_1185 0.44 -0.6 23,097 - Ac3H11_1185 0.44 +0.6 23,153 + Ac3H11_1185 0.49 -1.2 23,154 - Ac3H11_1185 0.49 +0.8 23,154 - Ac3H11_1185 0.49 +0.3 23,261 + Ac3H11_1185 0.60 +0.1 23,261 + Ac3H11_1185 0.60 +0.4 23,327 + Ac3H11_1185 0.66 +0.2
Or see this region's nucleotide sequence