Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS33685 and AZOBR_RS33690 overlap by 1 nucleotides AZOBR_RS33690 and AZOBR_RS33695 are separated by 79 nucleotides
AZOBR_RS33685: AZOBR_RS33685 - membrane protein, at 86,800 to 87,222
_RS33685
AZOBR_RS33690: AZOBR_RS33690 - hypothetical protein, at 87,222 to 88,724
_RS33690
AZOBR_RS33695: AZOBR_RS33695 - 4-hydroxy-4-methyl-2-oxoglutarate aldolase, at 88,804 to 89,472
_RS33695
Position (kb) 87
88
89 Strain fitness (log2 ratio) -1
0
1
2 at 87.381 kb on + strand, within AZOBR_RS33690 at 87.381 kb on + strand, within AZOBR_RS33690 at 87.382 kb on - strand, within AZOBR_RS33690 at 87.382 kb on - strand, within AZOBR_RS33690 at 87.382 kb on - strand, within AZOBR_RS33690 at 87.382 kb on - strand, within AZOBR_RS33690 at 87.426 kb on + strand, within AZOBR_RS33690 at 87.427 kb on - strand, within AZOBR_RS33690 at 87.427 kb on - strand, within AZOBR_RS33690 at 87.439 kb on - strand, within AZOBR_RS33690 at 87.660 kb on + strand, within AZOBR_RS33690 at 87.660 kb on + strand, within AZOBR_RS33690 at 87.660 kb on + strand, within AZOBR_RS33690 at 87.660 kb on + strand, within AZOBR_RS33690 at 87.661 kb on - strand, within AZOBR_RS33690 at 87.661 kb on - strand, within AZOBR_RS33690 at 87.661 kb on - strand, within AZOBR_RS33690 at 87.823 kb on - strand, within AZOBR_RS33690 at 88.057 kb on - strand, within AZOBR_RS33690 at 88.384 kb on - strand, within AZOBR_RS33690 at 88.390 kb on - strand, within AZOBR_RS33690 at 88.431 kb on + strand, within AZOBR_RS33690 at 88.431 kb on + strand, within AZOBR_RS33690 at 88.432 kb on - strand, within AZOBR_RS33690 at 88.432 kb on - strand, within AZOBR_RS33690 at 88.432 kb on - strand, within AZOBR_RS33690 at 88.432 kb on - strand, within AZOBR_RS33690 at 88.933 kb on + strand, within AZOBR_RS33695 at 88.934 kb on - strand, within AZOBR_RS33695
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 87,381 + AZOBR_RS33690 0.11 +0.5 87,381 + AZOBR_RS33690 0.11 +0.6 87,382 - AZOBR_RS33690 0.11 +0.6 87,382 - AZOBR_RS33690 0.11 +0.6 87,382 - AZOBR_RS33690 0.11 +0.2 87,382 - AZOBR_RS33690 0.11 -0.7 87,426 + AZOBR_RS33690 0.14 -1.3 87,427 - AZOBR_RS33690 0.14 +1.0 87,427 - AZOBR_RS33690 0.14 +1.5 87,439 - AZOBR_RS33690 0.14 -0.3 87,660 + AZOBR_RS33690 0.29 +0.1 87,660 + AZOBR_RS33690 0.29 -0.3 87,660 + AZOBR_RS33690 0.29 +0.3 87,660 + AZOBR_RS33690 0.29 +0.5 87,661 - AZOBR_RS33690 0.29 +0.9 87,661 - AZOBR_RS33690 0.29 +0.3 87,661 - AZOBR_RS33690 0.29 +0.6 87,823 - AZOBR_RS33690 0.40 -1.4 88,057 - AZOBR_RS33690 0.56 -0.3 88,384 - AZOBR_RS33690 0.77 +0.5 88,390 - AZOBR_RS33690 0.78 +0.6 88,431 + AZOBR_RS33690 0.80 +0.3 88,431 + AZOBR_RS33690 0.80 +0.5 88,432 - AZOBR_RS33690 0.81 -0.4 88,432 - AZOBR_RS33690 0.81 +0.3 88,432 - AZOBR_RS33690 0.81 +2.0 88,432 - AZOBR_RS33690 0.81 +0.5 88,933 + AZOBR_RS33695 0.19 +0.3 88,934 - AZOBR_RS33695 0.19 -0.8
Or see this region's nucleotide sequence