Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15325 and AZOBR_RS15330 are separated by 194 nucleotides AZOBR_RS15330 and AZOBR_RS15335 are separated by 41 nucleotides AZOBR_RS15335 and AZOBR_RS15340 are separated by 256 nucleotides
AZOBR_RS15325: AZOBR_RS15325 - multidrug transporter, at 203,103 to 204,482
_RS15325
AZOBR_RS15330: AZOBR_RS15330 - entericidin EcnAB, at 204,677 to 204,829
_RS15330
AZOBR_RS15335: AZOBR_RS15335 - hypothetical protein, at 204,871 to 205,059
_RS15335
AZOBR_RS15340: AZOBR_RS15340 - hypothetical protein, at 205,316 to 205,942
_RS15340
Position (kb) 204
205
206 Strain fitness (log2 ratio) -1
0
1 at 204.022 kb on + strand, within AZOBR_RS15325 at 204.022 kb on + strand, within AZOBR_RS15325 at 204.022 kb on + strand, within AZOBR_RS15325 at 204.023 kb on - strand, within AZOBR_RS15325 at 204.023 kb on - strand, within AZOBR_RS15325 at 204.507 kb on - strand at 204.575 kb on + strand at 204.575 kb on + strand at 204.575 kb on + strand at 204.576 kb on - strand at 204.576 kb on - strand at 204.847 kb on + strand at 204.847 kb on + strand at 204.847 kb on + strand at 204.848 kb on - strand at 204.848 kb on - strand at 204.848 kb on - strand at 205.244 kb on + strand at 205.257 kb on - strand at 205.353 kb on - strand at 205.502 kb on + strand, within AZOBR_RS15340 at 205.503 kb on - strand, within AZOBR_RS15340 at 205.697 kb on - strand, within AZOBR_RS15340 at 205.697 kb on - strand, within AZOBR_RS15340 at 205.778 kb on + strand, within AZOBR_RS15340 at 205.778 kb on + strand, within AZOBR_RS15340 at 205.779 kb on - strand, within AZOBR_RS15340 at 205.928 kb on + strand at 205.929 kb on - strand at 205.929 kb on - strand at 205.948 kb on - strand at 205.967 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 204,022 + AZOBR_RS15325 0.67 +0.9 204,022 + AZOBR_RS15325 0.67 +0.4 204,022 + AZOBR_RS15325 0.67 -0.2 204,023 - AZOBR_RS15325 0.67 +0.5 204,023 - AZOBR_RS15325 0.67 +0.2 204,507 - -0.0 204,575 + +0.9 204,575 + +0.0 204,575 + -1.3 204,576 - -0.0 204,576 - +0.1 204,847 + -0.2 204,847 + -0.4 204,847 + -0.3 204,848 - +0.0 204,848 - -0.5 204,848 - -0.2 205,244 + -0.4 205,257 - -0.3 205,353 - -0.4 205,502 + AZOBR_RS15340 0.30 +0.8 205,503 - AZOBR_RS15340 0.30 -0.0 205,697 - AZOBR_RS15340 0.61 +0.1 205,697 - AZOBR_RS15340 0.61 +0.7 205,778 + AZOBR_RS15340 0.74 +0.8 205,778 + AZOBR_RS15340 0.74 +1.5 205,779 - AZOBR_RS15340 0.74 +0.7 205,928 + -0.8 205,929 - -0.8 205,929 - +0.3 205,948 - -0.2 205,967 - -0.1
Or see this region's nucleotide sequence