Experiment: Chloramphenicol 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14950 and AO353_14955 are separated by 554 nucleotides AO353_14955 and AO353_14960 are separated by 179 nucleotides AO353_14960 and AO353_14965 are separated by 60 nucleotides
AO353_14950: AO353_14950 - hypothetical protein, at 3,305,685 to 3,306,269
_14950
AO353_14955: AO353_14955 - hypothetical protein, at 3,306,824 to 3,307,030
_14955
AO353_14960: AO353_14960 - hypothetical protein, at 3,307,210 to 3,307,500
_14960
AO353_14965: AO353_14965 - glycerol acyltransferase, at 3,307,561 to 3,308,727
_14965
Position (kb) 3306
3307
3308 Strain fitness (log2 ratio) -2
-1
0
1
2 at 3305.985 kb on - strand, within AO353_14950 at 3305.985 kb on - strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.991 kb on + strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3305.992 kb on - strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.033 kb on + strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.034 kb on - strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.057 kb on + strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.058 kb on - strand, within AO353_14950 at 3306.075 kb on - strand, within AO353_14950 at 3306.075 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.121 kb on - strand, within AO353_14950 at 3306.355 kb on - strand at 3306.396 kb on + strand at 3306.402 kb on + strand at 3306.402 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.412 kb on + strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.413 kb on - strand at 3306.599 kb on + strand at 3306.599 kb on + strand at 3306.599 kb on + strand at 3306.599 kb on + strand at 3306.825 kb on + strand at 3306.826 kb on - strand at 3306.826 kb on - strand at 3306.836 kb on + strand at 3306.836 kb on + strand at 3306.836 kb on + strand at 3306.836 kb on + strand at 3306.836 kb on + strand at 3306.836 kb on + strand at 3306.836 kb on + strand at 3306.837 kb on - strand at 3306.837 kb on - strand at 3306.837 kb on - strand at 3306.837 kb on - strand at 3306.837 kb on - strand at 3306.837 kb on - strand at 3306.840 kb on + strand at 3306.840 kb on + strand at 3306.840 kb on + strand at 3306.840 kb on + strand at 3306.840 kb on + strand at 3306.840 kb on + strand at 3306.840 kb on + strand at 3306.840 kb on + strand at 3306.841 kb on - strand at 3306.841 kb on - strand at 3306.841 kb on - strand at 3306.919 kb on - strand, within AO353_14955 at 3306.999 kb on + strand, within AO353_14955 at 3306.999 kb on + strand, within AO353_14955 at 3306.999 kb on + strand, within AO353_14955 at 3306.999 kb on + strand, within AO353_14955 at 3306.999 kb on + strand, within AO353_14955 at 3307.000 kb on - strand, within AO353_14955 at 3307.000 kb on - strand, within AO353_14955 at 3307.000 kb on - strand, within AO353_14955 at 3307.074 kb on + strand at 3307.074 kb on + strand at 3307.075 kb on - strand at 3307.103 kb on + strand at 3307.104 kb on - strand at 3307.104 kb on - strand at 3307.104 kb on - strand at 3307.104 kb on - strand at 3307.111 kb on - strand at 3307.111 kb on - strand at 3307.111 kb on - strand at 3307.198 kb on + strand at 3307.199 kb on - strand at 3307.201 kb on - strand at 3307.224 kb on + strand at 3307.224 kb on + strand at 3307.224 kb on + strand at 3307.224 kb on + strand at 3307.224 kb on + strand at 3307.224 kb on + strand at 3307.224 kb on + strand at 3307.225 kb on - strand at 3307.225 kb on - strand at 3307.225 kb on - strand at 3307.225 kb on - strand at 3307.470 kb on - strand, within AO353_14960 at 3307.547 kb on - strand at 3307.547 kb on - strand at 3307.562 kb on + strand at 3307.562 kb on + strand at 3307.562 kb on + strand at 3307.562 kb on + strand at 3307.563 kb on - strand at 3307.563 kb on - strand at 3307.563 kb on - strand at 3307.563 kb on - strand at 3307.563 kb on - strand at 3307.563 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.004 mg/ml remove 3,305,985 - AO353_14950 0.51 +0.1 3,305,985 - AO353_14950 0.51 -0.3 3,305,991 + AO353_14950 0.52 -0.7 3,305,991 + AO353_14950 0.52 -0.9 3,305,991 + AO353_14950 0.52 +0.9 3,305,991 + AO353_14950 0.52 -0.1 3,305,991 + AO353_14950 0.52 +0.9 3,305,991 + AO353_14950 0.52 +0.1 3,305,991 + AO353_14950 0.52 -0.4 3,305,991 + AO353_14950 0.52 -0.1 3,305,991 + AO353_14950 0.52 -0.9 3,305,991 + AO353_14950 0.52 -0.9 3,305,991 + AO353_14950 0.52 +1.5 3,305,991 + AO353_14950 0.52 +0.4 3,305,992 - AO353_14950 0.52 -0.0 3,305,992 - AO353_14950 0.52 -1.5 3,305,992 - AO353_14950 0.52 +0.2 3,305,992 - AO353_14950 0.52 +0.2 3,305,992 - AO353_14950 0.52 +0.7 3,305,992 - AO353_14950 0.52 +0.1 3,305,992 - AO353_14950 0.52 +0.7 3,305,992 - AO353_14950 0.52 +0.9 3,305,992 - AO353_14950 0.52 +0.4 3,305,992 - AO353_14950 0.52 +0.3 3,305,992 - AO353_14950 0.52 -1.2 3,305,992 - AO353_14950 0.52 -0.2 3,305,992 - AO353_14950 0.52 -1.5 3,305,992 - AO353_14950 0.52 +0.1 3,305,992 - AO353_14950 0.52 -1.4 3,305,992 - AO353_14950 0.52 +0.8 3,305,992 - AO353_14950 0.52 +0.4 3,305,992 - AO353_14950 0.52 +1.4 3,306,033 + AO353_14950 0.59 +0.9 3,306,033 + AO353_14950 0.59 -0.7 3,306,033 + AO353_14950 0.59 -2.2 3,306,033 + AO353_14950 0.59 +0.7 3,306,033 + AO353_14950 0.59 -0.4 3,306,033 + AO353_14950 0.59 -0.2 3,306,034 - AO353_14950 0.60 -0.1 3,306,034 - AO353_14950 0.60 -0.3 3,306,034 - AO353_14950 0.60 +0.9 3,306,057 + AO353_14950 0.64 +0.9 3,306,057 + AO353_14950 0.64 -1.2 3,306,057 + AO353_14950 0.64 -0.8 3,306,057 + AO353_14950 0.64 -1.3 3,306,057 + AO353_14950 0.64 +0.8 3,306,057 + AO353_14950 0.64 -0.2 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 -2.0 3,306,057 + AO353_14950 0.64 +1.6 3,306,057 + AO353_14950 0.64 +0.5 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 -0.2 3,306,057 + AO353_14950 0.64 -1.2 3,306,057 + AO353_14950 0.64 +0.2 3,306,057 + AO353_14950 0.64 +0.4 3,306,057 + AO353_14950 0.64 +0.8 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 -0.0 3,306,057 + AO353_14950 0.64 -0.9 3,306,057 + AO353_14950 0.64 -0.8 3,306,057 + AO353_14950 0.64 +0.9 3,306,057 + AO353_14950 0.64 -0.7 3,306,057 + AO353_14950 0.64 +0.6 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 +1.1 3,306,057 + AO353_14950 0.64 +2.7 3,306,057 + AO353_14950 0.64 +0.1 3,306,057 + AO353_14950 0.64 +0.1 3,306,057 + AO353_14950 0.64 +0.9 3,306,057 + AO353_14950 0.64 -1.1 3,306,057 + AO353_14950 0.64 +1.0 3,306,057 + AO353_14950 0.64 -0.3 3,306,057 + AO353_14950 0.64 +0.7 3,306,057 + AO353_14950 0.64 -1.2 3,306,057 + AO353_14950 0.64 -0.1 3,306,057 + AO353_14950 0.64 -0.1 3,306,057 + AO353_14950 0.64 +1.5 3,306,057 + AO353_14950 0.64 -1.4 3,306,057 + AO353_14950 0.64 +1.4 3,306,057 + AO353_14950 0.64 +0.3 3,306,057 + AO353_14950 0.64 +0.5 3,306,057 + AO353_14950 0.64 +1.1 3,306,058 - AO353_14950 0.64 +0.5 3,306,058 - AO353_14950 0.64 -2.3 3,306,058 - AO353_14950 0.64 +1.5 3,306,058 - AO353_14950 0.64 +0.4 3,306,058 - AO353_14950 0.64 -0.9 3,306,058 - AO353_14950 0.64 -0.3 3,306,058 - AO353_14950 0.64 +1.1 3,306,058 - AO353_14950 0.64 +0.7 3,306,058 - AO353_14950 0.64 -1.2 3,306,058 - AO353_14950 0.64 -0.1 3,306,058 - AO353_14950 0.64 -0.5 3,306,058 - AO353_14950 0.64 -0.2 3,306,058 - AO353_14950 0.64 -0.1 3,306,058 - AO353_14950 0.64 -1.7 3,306,058 - AO353_14950 0.64 -0.7 3,306,058 - AO353_14950 0.64 +1.0 3,306,058 - AO353_14950 0.64 -1.2 3,306,058 - AO353_14950 0.64 -0.7 3,306,058 - AO353_14950 0.64 -1.5 3,306,058 - AO353_14950 0.64 -1.7 3,306,058 - AO353_14950 0.64 -0.5 3,306,058 - AO353_14950 0.64 +0.9 3,306,058 - AO353_14950 0.64 -1.1 3,306,058 - AO353_14950 0.64 -0.1 3,306,058 - AO353_14950 0.64 +0.1 3,306,058 - AO353_14950 0.64 +0.0 3,306,058 - AO353_14950 0.64 +0.1 3,306,058 - AO353_14950 0.64 +0.3 3,306,058 - AO353_14950 0.64 +0.3 3,306,058 - AO353_14950 0.64 -1.2 3,306,058 - AO353_14950 0.64 +0.1 3,306,058 - AO353_14950 0.64 -0.0 3,306,058 - AO353_14950 0.64 +0.1 3,306,058 - AO353_14950 0.64 -0.1 3,306,058 - AO353_14950 0.64 -0.8 3,306,058 - AO353_14950 0.64 +1.1 3,306,058 - AO353_14950 0.64 +0.3 3,306,058 - AO353_14950 0.64 -0.9 3,306,058 - AO353_14950 0.64 +0.8 3,306,058 - AO353_14950 0.64 -0.3 3,306,075 - AO353_14950 0.67 -0.1 3,306,075 - AO353_14950 0.67 +0.0 3,306,121 - AO353_14950 0.75 -1.2 3,306,121 - AO353_14950 0.75 -1.0 3,306,121 - AO353_14950 0.75 -0.7 3,306,355 - +0.3 3,306,396 + +1.1 3,306,402 + -0.6 3,306,402 + +0.9 3,306,412 + +0.9 3,306,412 + -0.0 3,306,412 + +1.1 3,306,412 + -0.2 3,306,412 + +0.1 3,306,413 - +0.3 3,306,413 - -1.1 3,306,413 - +0.3 3,306,413 - -1.0 3,306,413 - -0.2 3,306,599 + +0.7 3,306,599 + +0.6 3,306,599 + +1.0 3,306,599 + +1.4 3,306,825 + -0.7 3,306,826 - -0.5 3,306,826 - -0.5 3,306,836 + +0.6 3,306,836 + +0.9 3,306,836 + +0.1 3,306,836 + -0.9 3,306,836 + +1.1 3,306,836 + +0.1 3,306,836 + -1.0 3,306,837 - +1.2 3,306,837 - +0.2 3,306,837 - +0.1 3,306,837 - +1.0 3,306,837 - -1.8 3,306,837 - -0.2 3,306,840 + -0.1 3,306,840 + +0.6 3,306,840 + -1.1 3,306,840 + -0.2 3,306,840 + +0.2 3,306,840 + -0.7 3,306,840 + +1.2 3,306,840 + -0.8 3,306,841 - +0.3 3,306,841 - +0.7 3,306,841 - +0.1 3,306,919 - AO353_14955 0.46 -0.1 3,306,999 + AO353_14955 0.85 -0.7 3,306,999 + AO353_14955 0.85 -1.9 3,306,999 + AO353_14955 0.85 -0.1 3,306,999 + AO353_14955 0.85 -1.3 3,306,999 + AO353_14955 0.85 -1.4 3,307,000 - AO353_14955 0.85 -0.0 3,307,000 - AO353_14955 0.85 +0.5 3,307,000 - AO353_14955 0.85 -0.4 3,307,074 + +1.2 3,307,074 + +0.3 3,307,075 - -1.8 3,307,103 + +0.5 3,307,104 - -0.4 3,307,104 - -0.1 3,307,104 - +0.5 3,307,104 - -0.2 3,307,111 - +0.6 3,307,111 - -0.7 3,307,111 - +1.1 3,307,198 + -0.2 3,307,199 - +0.5 3,307,201 - +1.3 3,307,224 + -0.1 3,307,224 + -0.5 3,307,224 + +0.4 3,307,224 + +0.1 3,307,224 + -0.4 3,307,224 + +0.1 3,307,224 + +0.4 3,307,225 - +1.3 3,307,225 - -0.1 3,307,225 - -0.3 3,307,225 - -0.4 3,307,470 - AO353_14960 0.89 -1.1 3,307,547 - +0.7 3,307,547 - -1.4 3,307,562 + +1.5 3,307,562 + -1.1 3,307,562 + -0.2 3,307,562 + -1.2 3,307,563 - +0.9 3,307,563 - +0.4 3,307,563 - +0.9 3,307,563 - -1.3 3,307,563 - -0.2 3,307,563 - +1.3
Or see this region's nucleotide sequence