Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12390

Experiment: Chloramphenicol 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.004 mg/ml
2,723,721	-				+0.2
2,723,721	-				-0.1
2,723,721	-				+0.1
2,723,721	-				+0.3
2,723,759	+				-0.1
2,723,759	+				-0.4
2,723,759	+				-0.4
2,723,759	+				+0.6
2,723,759	+				-0.8
2,723,759	+				-0.4
2,723,759	+				+1.0
2,723,760	-				+1.4
2,723,760	-				-2.3
2,723,760	-				-0.6
2,723,760	-				+0.9
2,723,760	-				+1.2
2,723,760	-				+0.3
2,723,760	-				-0.0
2,723,760	-				-0.5
2,723,760	-				-0.7
2,723,760	-				-0.3
2,723,764	+				+0.1
2,723,764	+				+1.2
2,723,764	+				+0.2
2,723,764	+				+0.5
2,723,764	+				+0.3
2,723,765	-				-1.5
2,723,765	-				-0.5
2,723,765	-				+0.2
2,723,765	-				+1.6
2,723,850	+				-0.2
2,723,850	+				-1.5
2,723,850	+				-0.7
2,723,850	+				+0.6
2,723,850	+				-1.0
2,723,853	+				+0.2
2,723,853	+				-0.4
2,723,853	+				-2.4
2,723,853	+				-0.3
2,723,853	+				-0.6
2,723,853	+				+1.2
2,723,854	-				-0.8
2,723,854	-				+0.1
2,723,854	-				-0.3
2,723,854	-				-0.1
2,723,854	-				+0.6
2,723,854	-				-0.5
2,723,854	-				-0.6
2,723,854	-				+0.0
2,723,854	-				+1.0
2,723,854	-				-0.1
2,724,004	+		AO353_12385	0.59	-1.5
2,724,004	+		AO353_12385	0.59	-1.4
2,724,004	+		AO353_12385	0.59	-0.1
2,724,004	+		AO353_12385	0.59	-0.9
2,724,004	+		AO353_12385	0.59	+1.0
2,724,004	+		AO353_12385	0.59	-0.1
2,724,004	+		AO353_12385	0.59	+0.4
2,724,004	+		AO353_12385	0.59	+0.9
2,724,004	+		AO353_12385	0.59	+1.0
2,724,004	+		AO353_12385	0.59	-0.1
2,724,004	+		AO353_12385	0.59	+0.4
2,724,004	+		AO353_12385	0.59	-0.8
2,724,004	+		AO353_12385	0.59	+0.0
2,724,004	+		AO353_12385	0.59	+0.3
2,724,005	-				+0.2
2,724,005	-		AO353_12385	0.59	-0.3
2,724,005	-		AO353_12385	0.59	-0.4
2,724,005	-		AO353_12385	0.59	+1.2
2,724,005	-		AO353_12385	0.59	+0.9
2,724,005	-		AO353_12385	0.59	-0.2
2,724,005	-		AO353_12385	0.59	+0.2
2,724,005	-		AO353_12385	0.59	+0.0
2,724,005	-		AO353_12385	0.59	-0.4
2,724,005	-		AO353_12385	0.59	-2.1
2,724,005	-		AO353_12385	0.59	-0.3
2,724,102	+				+0.3
2,724,133	+				-1.5
2,724,134	-				+0.1
2,724,160	+				-0.4
2,724,160	+				+0.1
2,724,160	+				-0.5
2,724,160	+				-0.3
2,724,160	+				+0.6
2,724,161	-				+1.0
2,724,161	-				-1.5
2,724,161	-				+0.0
2,724,161	-				-0.4
2,724,161	-				+0.5
2,724,161	-				-0.1
2,724,162	+				-0.5
2,724,162	+				+0.2
2,724,162	+				+1.7
2,724,162	+				-1.2
2,724,162	+				+1.2
2,724,163	-				-0.7
2,724,163	-				-0.0
2,724,163	-				+1.2
2,724,163	-				-0.6
2,724,208	+				+0.2
2,724,208	+				+0.4
2,724,208	+				-1.1
2,724,208	+				-0.5
2,724,209	-				+0.6
2,724,271	+				-1.0
2,724,272	-				+0.3
2,724,272	-				-0.7
2,724,272	-				-0.1
2,724,272	-				-0.0
2,724,272	-				-2.8
2,724,272	-				-0.4
2,724,347	+				-2.0
2,724,347	+				+0.8
2,724,403	-		AO353_12390	0.16	+0.2
2,724,403	-		AO353_12390	0.16	-1.3
2,724,439	-		AO353_12390	0.24	-1.7
2,724,439	-		AO353_12390	0.24	-1.1
2,724,439	-		AO353_12390	0.24	-1.1
2,724,439	-		AO353_12390	0.24	+0.7
2,724,468	+		AO353_12390	0.31	-0.3
2,724,584	+		AO353_12390	0.59	-0.1
2,724,680	+		AO353_12390	0.81	+0.0
2,724,707	+		AO353_12390	0.88	+0.6
2,724,707	+		AO353_12390	0.88	+0.6
2,724,757	-				-1.0
2,724,777	+				-0.6
2,724,829	+				+0.4
2,724,829	+				+0.6
2,724,829	+				+0.3
2,724,857	+		AO353_12395	0.11	+0.4
2,724,857	+		AO353_12395	0.11	+0.6
2,725,200	+		AO353_12395	0.54	-0.4
2,725,200	+		AO353_12395	0.54	+1.2
2,725,228	-		AO353_12395	0.57	-0.6
2,725,311	+		AO353_12395	0.68	+0.0
2,725,312	-		AO353_12395	0.68	-0.1
2,725,312	-		AO353_12395	0.68	+0.4
2,725,407	-		AO353_12395	0.80	-0.8
2,725,533	-				+0.3
2,725,658	+				+0.3
2,725,659	-				+0.8
2,725,698	+				-0.3
2,725,717	+				+0.2
2,725,717	+				-0.8
2,725,717	+				+0.6
2,725,718	-				+1.3
2,725,718	-				-1.5
2,725,718	-				-0.3
2,725,718	-				+0.0
2,725,724	+				+0.7
2,725,724	+				-0.2
2,725,724	+				+2.2
2,725,724	+				+0.4
2,725,724	+				-0.6
2,725,724	+				-1.0
2,725,724	+				+0.6
2,725,724	+				-0.5
2,725,725	-				+0.3
2,725,725	-				+0.5
2,725,725	-				-0.2
2,725,725	-				+0.3
2,725,725	-				+0.1
2,725,725	-				-0.6
2,725,725	-				+0.3