Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1984 and DvMF_1985 are separated by 1 nucleotides DvMF_1985 and DvMF_1986 are separated by 377 nucleotides
DvMF_1984: DvMF_1984 - protein of unknown function DUF81 (RefSeq), at 2,455,824 to 2,457,071
_1984
DvMF_1985: DvMF_1985 - hypothetical protein (RefSeq), at 2,457,073 to 2,457,792
_1985
DvMF_1986: DvMF_1986 - Superoxide dismutase (RefSeq), at 2,458,170 to 2,458,886
_1986
Position (kb)
2457
2458 Strain fitness (log2 ratio)
-1
0
1 at 2456.103 kb on + strand, within DvMF_1984 at 2456.163 kb on - strand, within DvMF_1984 at 2456.180 kb on - strand, within DvMF_1984 at 2456.397 kb on - strand, within DvMF_1984 at 2456.399 kb on + strand, within DvMF_1984 at 2456.756 kb on + strand, within DvMF_1984 at 2456.768 kb on + strand, within DvMF_1984 at 2456.839 kb on - strand, within DvMF_1984 at 2456.914 kb on - strand, within DvMF_1984 at 2457.228 kb on + strand, within DvMF_1985 at 2457.267 kb on - strand, within DvMF_1985 at 2457.303 kb on + strand, within DvMF_1985 at 2457.319 kb on - strand, within DvMF_1985 at 2457.399 kb on - strand, within DvMF_1985 at 2457.445 kb on + strand, within DvMF_1985 at 2457.495 kb on - strand, within DvMF_1985 at 2457.738 kb on + strand at 2457.738 kb on + strand at 2457.746 kb on + strand at 2457.830 kb on + strand at 2457.863 kb on + strand at 2458.011 kb on + strand at 2458.257 kb on + strand, within DvMF_1986 at 2458.498 kb on - strand, within DvMF_1986 at 2458.516 kb on - strand, within DvMF_1986 at 2458.529 kb on - strand, within DvMF_1986 at 2458.530 kb on - strand, within DvMF_1986 at 2458.746 kb on + strand, within DvMF_1986
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,456,103 + DvMF_1984 0.22 -0.7 2,456,163 - DvMF_1984 0.27 -0.6 2,456,180 - DvMF_1984 0.29 -0.4 2,456,397 - DvMF_1984 0.46 -0.1 2,456,399 + DvMF_1984 0.46 -1.5 2,456,756 + DvMF_1984 0.75 -0.6 2,456,768 + DvMF_1984 0.76 -0.6 2,456,839 - DvMF_1984 0.81 -0.7 2,456,914 - DvMF_1984 0.87 -0.5 2,457,228 + DvMF_1985 0.22 -0.8 2,457,267 - DvMF_1985 0.27 -0.6 2,457,303 + DvMF_1985 0.32 -1.2 2,457,319 - DvMF_1985 0.34 -1.4 2,457,399 - DvMF_1985 0.45 -0.3 2,457,445 + DvMF_1985 0.52 -0.9 2,457,495 - DvMF_1985 0.59 -0.7 2,457,738 + -0.1 2,457,738 + -0.7 2,457,746 + +0.2 2,457,830 + -0.9 2,457,863 + -0.8 2,458,011 + -0.4 2,458,257 + DvMF_1986 0.12 -0.3 2,458,498 - DvMF_1986 0.46 -0.3 2,458,516 - DvMF_1986 0.48 -0.3 2,458,529 - DvMF_1986 0.50 -0.1 2,458,530 - DvMF_1986 0.50 +0.8 2,458,746 + DvMF_1986 0.80 -0.9
Or see this region's nucleotide sequence