Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1953 and DvMF_1954 are separated by 95 nucleotides DvMF_1954 and DvMF_1955 are separated by 18 nucleotides DvMF_1955 and DvMF_1956 are separated by 78 nucleotides
DvMF_1953: DvMF_1953 - UBA/THIF-type NAD/FAD binding protein (RefSeq), at 2,414,670 to 2,415,680
_1953
DvMF_1954: DvMF_1954 - hypothetical protein (RefSeq), at 2,415,776 to 2,416,114
_1954
DvMF_1955: DvMF_1955 - thiamineS protein (RefSeq), at 2,416,133 to 2,416,360
_1955
DvMF_1956: DvMF_1956 - Aldehyde ferredoxin oxidoreductase (RefSeq), at 2,416,439 to 2,418,166
_1956
Position (kb)
2416
2417 Strain fitness (log2 ratio)
-1
0
1 at 2415.329 kb on - strand, within DvMF_1953 at 2415.508 kb on - strand, within DvMF_1953 at 2415.784 kb on + strand at 2416.123 kb on - strand at 2416.129 kb on + strand at 2416.157 kb on - strand, within DvMF_1955 at 2416.199 kb on + strand, within DvMF_1955 at 2416.496 kb on - strand at 2416.874 kb on + strand, within DvMF_1956 at 2416.882 kb on - strand, within DvMF_1956 at 2416.966 kb on - strand, within DvMF_1956 at 2416.980 kb on + strand, within DvMF_1956 at 2417.262 kb on - strand, within DvMF_1956
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,415,329 - DvMF_1953 0.65 +0.4 2,415,508 - DvMF_1953 0.83 -0.2 2,415,784 + -0.5 2,416,123 - -0.3 2,416,129 + -0.3 2,416,157 - DvMF_1955 0.11 -1.7 2,416,199 + DvMF_1955 0.29 -0.3 2,416,496 - +0.7 2,416,874 + DvMF_1956 0.25 -0.0 2,416,882 - DvMF_1956 0.26 -0.1 2,416,966 - DvMF_1956 0.30 +0.1 2,416,980 + DvMF_1956 0.31 +0.1 2,417,262 - DvMF_1956 0.48 -0.6
Or see this region's nucleotide sequence