Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1797 and DvMF_1798 are separated by 69 nucleotides DvMF_1798 and DvMF_1799 are separated by 188 nucleotides
DvMF_1797: DvMF_1797 - molybdenum cofactor synthesis domain protein (RefSeq), at 2,196,700 to 2,198,667
_1797
DvMF_1798: DvMF_1798 - sigma54 specific transcriptional acivator, PspF, Fis family (RefSeq), at 2,198,737 to 2,200,041
_1798
DvMF_1799: DvMF_1799 - phage shock protein A, PspA (RefSeq), at 2,200,230 to 2,200,961
_1799
Position (kb)
2198
2199
2200
2201 Strain fitness (log2 ratio)
-1
0
1 at 2197.855 kb on - strand, within DvMF_1797 at 2197.928 kb on - strand, within DvMF_1797 at 2197.933 kb on + strand, within DvMF_1797 at 2197.982 kb on - strand, within DvMF_1797 at 2198.080 kb on + strand, within DvMF_1797 at 2198.399 kb on + strand, within DvMF_1797 at 2198.464 kb on + strand, within DvMF_1797 at 2198.805 kb on - strand at 2198.839 kb on + strand at 2198.847 kb on - strand at 2198.847 kb on - strand at 2198.961 kb on + strand, within DvMF_1798 at 2198.961 kb on + strand, within DvMF_1798 at 2198.969 kb on - strand, within DvMF_1798 at 2198.986 kb on + strand, within DvMF_1798 at 2198.986 kb on + strand, within DvMF_1798 at 2198.994 kb on - strand, within DvMF_1798 at 2199.045 kb on + strand, within DvMF_1798 at 2199.093 kb on + strand, within DvMF_1798 at 2199.149 kb on + strand, within DvMF_1798 at 2199.205 kb on - strand, within DvMF_1798 at 2199.369 kb on - strand, within DvMF_1798 at 2199.369 kb on - strand, within DvMF_1798 at 2199.391 kb on - strand, within DvMF_1798 at 2199.419 kb on - strand, within DvMF_1798 at 2199.491 kb on - strand, within DvMF_1798 at 2199.659 kb on + strand, within DvMF_1798 at 2200.196 kb on + strand at 2200.292 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,197,855 - DvMF_1797 0.59 +0.9 2,197,928 - DvMF_1797 0.62 +0.1 2,197,933 + DvMF_1797 0.63 -1.3 2,197,982 - DvMF_1797 0.65 +0.3 2,198,080 + DvMF_1797 0.70 +0.0 2,198,399 + DvMF_1797 0.86 -0.1 2,198,464 + DvMF_1797 0.90 -0.3 2,198,805 - -0.3 2,198,839 + -0.8 2,198,847 - -1.1 2,198,847 - -0.7 2,198,961 + DvMF_1798 0.17 -0.4 2,198,961 + DvMF_1798 0.17 -0.2 2,198,969 - DvMF_1798 0.18 -0.9 2,198,986 + DvMF_1798 0.19 -0.4 2,198,986 + DvMF_1798 0.19 +1.6 2,198,994 - DvMF_1798 0.20 -0.5 2,199,045 + DvMF_1798 0.24 -0.5 2,199,093 + DvMF_1798 0.27 -0.6 2,199,149 + DvMF_1798 0.32 -0.7 2,199,205 - DvMF_1798 0.36 -0.9 2,199,369 - DvMF_1798 0.48 -0.7 2,199,369 - DvMF_1798 0.48 -1.0 2,199,391 - DvMF_1798 0.50 -0.8 2,199,419 - DvMF_1798 0.52 -1.1 2,199,491 - DvMF_1798 0.58 -0.7 2,199,659 + DvMF_1798 0.71 -1.4 2,200,196 + -0.2 2,200,292 + -0.7
Or see this region's nucleotide sequence