Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0337 and DvMF_0338 are separated by 179 nucleotides DvMF_0338 and DvMF_0339 are separated by 119 nucleotides DvMF_0339 and DvMF_0340 are separated by 365 nucleotides
DvMF_0337: DvMF_0337 - phospholipid/glycerol acyltransferase (RefSeq), at 393,970 to 394,812
_0337
DvMF_0338: DvMF_0338 - glycosyl transferase, group 2 family protein (RefSeq), at 394,992 to 395,663
_0338
DvMF_0339: DvMF_0339 - recombination factor protein RarA (RefSeq), at 395,783 to 397,009
_0339
DvMF_0340: DvMF_0340 - 16S ribosomal RNA methyltransferase RsmE (RefSeq), at 397,375 to 398,094
_0340
Position (kb) 395
396
397
398 Strain fitness (log2 ratio) -2
-1
0
1 at 394.860 kb on + strand at 395.343 kb on - strand, within DvMF_0338 at 395.410 kb on + strand, within DvMF_0338 at 395.594 kb on + strand, within DvMF_0338 at 395.602 kb on - strand at 395.716 kb on + strand at 396.045 kb on + strand, within DvMF_0339 at 396.326 kb on - strand, within DvMF_0339 at 396.455 kb on + strand, within DvMF_0339 at 396.883 kb on + strand, within DvMF_0339 at 396.974 kb on - strand at 397.082 kb on - strand at 397.238 kb on + strand at 397.399 kb on + strand at 397.523 kb on - strand, within DvMF_0340
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 394,860 + -1.0 395,343 - DvMF_0338 0.52 -0.4 395,410 + DvMF_0338 0.62 -0.5 395,594 + DvMF_0338 0.90 +0.0 395,602 - -0.7 395,716 + +0.1 396,045 + DvMF_0339 0.21 -1.1 396,326 - DvMF_0339 0.44 -0.3 396,455 + DvMF_0339 0.55 -0.5 396,883 + DvMF_0339 0.90 -1.8 396,974 - -0.3 397,082 - -0.7 397,238 + -0.1 397,399 + -0.5 397,523 - DvMF_0340 0.21 -0.7
Or see this region's nucleotide sequence