Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4064

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,881,909	+				-0.3
4,881,917	-				-0.2
4,881,917	-				-1.5
4,881,917	-				+0.0
4,881,917	-				-1.8
4,881,987	+		Shewana3_4062	0.49	-0.1
4,882,172	-				-0.1
4,882,533	-		Shewana3_4063	0.66	-0.2
4,882,605	-		Shewana3_4063	0.79	+0.0
4,882,681	-				-0.0
4,882,681	-				-0.2
4,882,812	-				-1.0
4,882,968	-				-0.2
4,883,068	+		Shewana3_4064	0.17	-0.3
4,883,068	-		Shewana3_4064	0.17	-0.1
4,883,078	-		Shewana3_4064	0.18	+1.2
4,883,140	+		Shewana3_4064	0.23	+1.6
4,883,369	-		Shewana3_4064	0.42	-2.6
4,883,369	-		Shewana3_4064	0.42	-0.5
4,883,401	+		Shewana3_4064	0.45	+0.2
4,883,401	+		Shewana3_4064	0.45	+1.9
4,883,409	-		Shewana3_4064	0.46	-1.3
4,883,409	-		Shewana3_4064	0.46	-0.1
4,883,409	-		Shewana3_4064	0.46	+2.6
4,883,409	-		Shewana3_4064	0.46	+0.2
4,883,409	-		Shewana3_4064	0.46	-0.1
4,883,442	-		Shewana3_4064	0.48	+0.5
4,883,449	-		Shewana3_4064	0.49	-0.4
4,883,575	+		Shewana3_4064	0.59	+0.2
4,883,704	+		Shewana3_4064	0.70	-0.2
4,883,704	+		Shewana3_4064	0.70	-0.6
4,883,735	-		Shewana3_4064	0.73	-0.3
4,883,968	-				-0.1
4,883,971	-				+0.6
4,884,003	-				-0.3
4,884,045	-				+0.1
4,884,076	+				-0.2
4,884,099	-				-0.0
4,884,122	+				+1.6
4,884,145	-				-1.1
4,884,172	-		Shewana3_4065	0.11	-0.1
4,884,359	-		Shewana3_4065	0.29	-0.5
4,884,379	-		Shewana3_4065	0.31	-0.3
4,884,477	+		Shewana3_4065	0.41	-0.2
4,884,482	+		Shewana3_4065	0.41	+0.0
4,884,701	+		Shewana3_4065	0.62	+0.9
4,884,724	+		Shewana3_4065	0.65	+0.0
4,884,732	-		Shewana3_4065	0.65	+0.4
4,884,736	+		Shewana3_4065	0.66	-0.9
4,884,834	+		Shewana3_4065	0.75	-0.6
4,884,868	-		Shewana3_4065	0.79	+0.1
4,884,896	+		Shewana3_4065	0.81	+0.5
4,884,902	-		Shewana3_4065	0.82	+0.4
4,884,974	-		Shewana3_4065	0.89	-0.3