Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4025

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,833,990	-		Shewana3_4023	0.68	-0.8
4,834,046	+		Shewana3_4023	0.74	+0.0
4,834,065	-		Shewana3_4023	0.76	+0.4
4,834,076	-		Shewana3_4023	0.77	+0.1
4,834,100	-		Shewana3_4023	0.80	-0.3
4,834,133	+		Shewana3_4023	0.83	-0.5
4,834,133	+		Shewana3_4023	0.83	+0.3
4,834,141	-		Shewana3_4023	0.84	-0.9
4,834,236	+				-1.3
4,834,253	-				-0.2
4,834,328	+				-0.3
4,834,328	+				-0.5
4,834,336	-				+1.3
4,834,421	+				-0.5
4,834,429	+				+0.1
4,834,453	+				-0.8
4,834,461	+				-0.1
4,834,607	-				-0.7
4,834,685	-				-0.5
4,834,784	+		Shewana3_4024	0.42	-0.3
4,834,802	-		Shewana3_4024	0.48	-1.0
4,834,807	-		Shewana3_4024	0.50	-0.6
4,834,827	+		Shewana3_4024	0.56	+0.7
4,834,853	+		Shewana3_4024	0.65	-0.3
4,834,966	+				+0.0
4,835,027	+				-0.3
4,835,027	+				-0.4
4,835,027	+				-0.3
4,835,032	+		Shewana3_4025	0.10	-0.6
4,835,032	+		Shewana3_4025	0.10	-0.2
4,835,037	+		Shewana3_4025	0.11	-0.1
4,835,144	-		Shewana3_4025	0.27	-0.9
4,835,183	+		Shewana3_4025	0.32	-0.6
4,835,258	+		Shewana3_4025	0.43	-0.5
4,835,259	-		Shewana3_4025	0.44	-0.7
4,835,300	+		Shewana3_4025	0.50	+0.5
4,835,301	-		Shewana3_4025	0.50	-0.5
4,835,373	+		Shewana3_4025	0.60	-0.2
4,835,373	+		Shewana3_4025	0.60	-0.4
4,835,373	+		Shewana3_4025	0.60	-0.7
4,835,381	-		Shewana3_4025	0.61	-0.6
4,835,381	-		Shewana3_4025	0.61	-0.3
4,835,631	+				+0.1
4,835,631	+				-0.8
4,835,740	-				+0.7
4,836,030	-		Shewana3_4026	0.29	-0.3
4,836,272	-		Shewana3_4026	0.47	+0.4
4,836,280	+		Shewana3_4026	0.47	-1.0
4,836,283	-		Shewana3_4026	0.47	-0.5
4,836,298	-		Shewana3_4026	0.48	-0.3
4,836,305	+		Shewana3_4026	0.49	-1.2
4,836,313	+		Shewana3_4026	0.50	-0.8
4,836,370	-		Shewana3_4026	0.54	+1.3
4,836,425	+		Shewana3_4026	0.58	-0.5
4,836,521	+		Shewana3_4026	0.65	-0.4
4,836,522	-		Shewana3_4026	0.65	-0.2
4,836,529	-		Shewana3_4026	0.65	-0.2
4,836,573	-		Shewana3_4026	0.69	+0.2
4,836,575	+		Shewana3_4026	0.69	-0.2