Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4017

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,825,753	+		Shewana3_4016	0.88	+0.2
4,825,914	-				-0.5
4,825,982	-				+0.4
4,826,017	+				-0.3
4,826,118	+				-1.0
4,826,128	+				-0.2
4,826,174	-				+0.1
4,826,183	+				+0.5
4,826,209	+				-0.0
4,826,312	+				-0.8
4,826,765	+	ompR	Shewana3_4017	0.11	+0.5
4,826,772	+	ompR	Shewana3_4017	0.12	-0.0
4,826,772	+	ompR	Shewana3_4017	0.12	+0.1
4,826,772	+	ompR	Shewana3_4017	0.12	-0.8
4,826,772	+	ompR	Shewana3_4017	0.12	+0.0
4,826,799	-	ompR	Shewana3_4017	0.15	-2.3
4,826,804	-	ompR	Shewana3_4017	0.16	-1.1
4,827,020	-	ompR	Shewana3_4017	0.46	-0.0
4,827,034	+	ompR	Shewana3_4017	0.48	-0.3
4,827,042	-	ompR	Shewana3_4017	0.49	-0.6
4,827,042	-	ompR	Shewana3_4017	0.49	-0.6
4,827,076	-	ompR	Shewana3_4017	0.54	-0.1
4,827,135	+	ompR	Shewana3_4017	0.62	-0.3
4,827,180	-	ompR	Shewana3_4017	0.68	-0.2
4,827,208	-	ompR	Shewana3_4017	0.72	-1.3
4,827,269	-	ompR	Shewana3_4017	0.80	-0.3
4,827,464	-				-0.6
4,827,512	-				-0.5
4,827,512	-				+0.5
4,827,512	-				-0.1
4,827,574	-				-0.1
4,827,670	-	envZ	Shewana3_4018	0.17	-0.1
4,827,848	+	envZ	Shewana3_4018	0.30	-0.6
4,828,006	+	envZ	Shewana3_4018	0.42	-1.2
4,828,014	-	envZ	Shewana3_4018	0.43	-0.8
4,828,107	-	envZ	Shewana3_4018	0.50	-0.6
4,828,136	-	envZ	Shewana3_4018	0.52	-0.2
4,828,330	-	envZ	Shewana3_4018	0.67	-0.7
4,828,381	+	envZ	Shewana3_4018	0.71	-0.6
4,828,389	-	envZ	Shewana3_4018	0.71	-0.9
4,828,389	-	envZ	Shewana3_4018	0.71	-1.4