Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4000

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,801,106	-		Shewana3_3998	0.72	-0.3
4,801,165	-		Shewana3_3998	0.79	+0.4
4,801,189	+		Shewana3_3998	0.81	-0.3
4,801,407	+				-0.0
4,801,553	-		Shewana3_3999	0.26	-1.1
4,801,568	+		Shewana3_3999	0.28	-3.1
4,801,570	-		Shewana3_3999	0.28	+0.0
4,801,582	-		Shewana3_3999	0.30	-0.2
4,801,656	+		Shewana3_3999	0.42	-0.8
4,801,664	-		Shewana3_3999	0.43	-0.7
4,801,688	-		Shewana3_3999	0.46	-0.8
4,801,746	+		Shewana3_3999	0.55	-1.1
4,801,757	+		Shewana3_3999	0.57	-0.6
4,801,757	+		Shewana3_3999	0.57	+0.1
4,801,797	-		Shewana3_3999	0.63	-0.4
4,801,839	+		Shewana3_3999	0.69	-0.2
4,801,839	+		Shewana3_3999	0.69	-0.1
4,801,839	+		Shewana3_3999	0.69	+0.0
4,801,839	+		Shewana3_3999	0.69	-0.3
4,801,847	-		Shewana3_3999	0.70	-0.7
4,801,847	-		Shewana3_3999	0.70	-0.6
4,801,847	-		Shewana3_3999	0.70	+0.0
4,801,847	-		Shewana3_3999	0.70	+0.4
4,801,942	+		Shewana3_3999	0.85	-0.8
4,801,942	+		Shewana3_3999	0.85	-1.3
4,801,965	-		Shewana3_3999	0.88	-0.0
4,802,098	-				-0.0
4,802,146	+				-0.2
4,802,326	-		Shewana3_4000	0.26	-0.4
4,802,371	+		Shewana3_4000	0.30	-1.3
4,802,493	-		Shewana3_4000	0.42	+0.1
4,802,565	+		Shewana3_4000	0.49	-0.8
4,802,596	+		Shewana3_4000	0.52	-0.6
4,802,632	+		Shewana3_4000	0.55	-0.7
4,802,680	+		Shewana3_4000	0.60	-0.5
4,802,815	+		Shewana3_4000	0.73	-0.7
4,803,118	-				-0.7
4,803,197	-				+2.1
4,803,224	+				-0.1
4,803,296	+		Shewana3_4001	0.13	-0.1
4,803,311	-		Shewana3_4001	0.14	-0.2
4,803,376	+		Shewana3_4001	0.19	+0.2
4,803,376	+		Shewana3_4001	0.19	-0.3
4,803,376	+		Shewana3_4001	0.19	-0.4
4,803,376	+		Shewana3_4001	0.19	+1.8
4,803,384	-		Shewana3_4001	0.19	-0.5
4,803,413	-		Shewana3_4001	0.21	-0.4
4,803,585	+		Shewana3_4001	0.34	-0.7
4,803,675	+		Shewana3_4001	0.40	-0.1
4,803,709	+		Shewana3_4001	0.43	-0.1
4,803,761	-		Shewana3_4001	0.47	-0.8
4,803,769	+		Shewana3_4001	0.47	-1.2
4,803,777	-		Shewana3_4001	0.48	-0.7