Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3954

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,752,860	+				-0.2
4,752,868	-				-0.4
4,753,019	-		Shewana3_3953	0.22	-0.2
4,753,282	-		Shewana3_3953	0.59	-1.0
4,753,282	-		Shewana3_3953	0.59	-0.1
4,753,397	+		Shewana3_3953	0.75	+0.8
4,753,444	+		Shewana3_3953	0.82	+0.2
4,753,444	+		Shewana3_3953	0.82	+1.8
4,753,452	-		Shewana3_3953	0.83	-0.5
4,753,454	-		Shewana3_3953	0.83	-1.4
4,753,626	+				-2.5
4,753,783	-				-0.9
4,753,785	+				+0.2
4,753,793	-				-0.7
4,753,793	-				-0.3
4,753,941	-		Shewana3_3954	0.34	-0.1
4,753,959	+		Shewana3_3954	0.38	+0.2
4,753,977	+		Shewana3_3954	0.41	+1.9
4,754,138	-		Shewana3_3954	0.71	-0.1
4,754,138	-		Shewana3_3954	0.71	-0.4
4,754,140	+		Shewana3_3954	0.72	+0.1
4,754,184	+		Shewana3_3954	0.80	+0.3
4,754,309	-				-0.6
4,754,360	+				-0.7
4,754,365	+				-0.0
4,754,379	-				-0.1
4,754,610	+		Shewana3_3955	0.49	-0.6
4,754,616	+		Shewana3_3955	0.50	-0.1
4,754,779	+		Shewana3_3955	0.85	+0.2
4,754,934	+				-1.8
4,755,145	-		Shewana3_3956	0.25	+0.3
4,755,160	+		Shewana3_3956	0.27	-0.5
4,755,240	-		Shewana3_3956	0.37	+0.2
4,755,271	-		Shewana3_3956	0.41	-0.2
4,755,278	-		Shewana3_3956	0.41	+0.1
4,755,283	-		Shewana3_3956	0.42	-0.2