Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3874

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,651,163	-		Shewana3_3873	0.42	+1.6
4,651,205	+		Shewana3_3873	0.46	-0.8
4,651,319	+		Shewana3_3873	0.56	-0.6
4,651,319	+		Shewana3_3873	0.56	+1.7
4,651,444	+		Shewana3_3873	0.67	-0.0
4,651,707	-		Shewana3_3873	0.89	-1.3
4,651,854	+				-0.2
4,651,912	+				-0.9
4,651,984	+				-0.0
4,651,984	+				-0.2
4,652,087	+				+0.8
4,652,087	+				-0.3
4,652,087	+				-1.2
4,652,087	+				-1.3
4,652,087	+				+1.1
4,652,095	-				-0.1
4,652,095	-				+1.1
4,652,095	-				+0.5
4,652,095	-				+0.3
4,652,095	-				+0.3
4,652,095	-				-0.0
4,652,095	-				+0.5
4,652,095	-				+0.3
4,652,156	+				-1.0
4,652,200	-				+0.3
4,652,254	-				+0.2
4,652,289	-		Shewana3_3874	0.11	-0.1
4,652,369	-		Shewana3_3874	0.14	-0.2
4,652,409	-		Shewana3_3874	0.16	+0.5
4,652,541	-		Shewana3_3874	0.22	+0.3
4,652,603	+		Shewana3_3874	0.24	-0.2
4,652,619	+		Shewana3_3874	0.25	+1.2
4,652,627	-		Shewana3_3874	0.25	-0.1
4,652,627	-		Shewana3_3874	0.25	+0.3
4,652,644	-		Shewana3_3874	0.26	+0.1
4,652,695	+		Shewana3_3874	0.28	-0.4
4,652,698	-		Shewana3_3874	0.28	-0.3
4,652,805	+		Shewana3_3874	0.33	+1.3
4,652,847	-		Shewana3_3874	0.35	-0.2
4,652,847	-		Shewana3_3874	0.35	+0.6
4,652,960	-		Shewana3_3874	0.40	+0.4
4,653,397	-		Shewana3_3874	0.58	-0.6
4,653,526	-		Shewana3_3874	0.64	+0.1
4,653,718	+		Shewana3_3874	0.72	-0.8
4,653,723	+		Shewana3_3874	0.72	-0.1
4,653,728	+		Shewana3_3874	0.72	-0.2
4,653,731	-		Shewana3_3874	0.72	+0.0
4,653,793	-		Shewana3_3874	0.75	-0.2
4,653,885	+		Shewana3_3874	0.79	+1.6
4,653,893	-		Shewana3_3874	0.79	-0.1
4,653,893	-		Shewana3_3874	0.79	-0.3
4,653,943	-		Shewana3_3874	0.81	-0.3
4,653,983	-		Shewana3_3874	0.83	+0.4
4,653,989	-		Shewana3_3874	0.83	+0.1
4,654,209	+				+0.0
4,654,234	+				-0.0
4,654,257	+				+0.1
4,654,334	+				-1.0
4,654,359	-				+0.2
4,654,527	+				-0.2
4,654,535	-				+1.2
4,654,537	+				-0.8
4,654,577	-				+0.1
4,654,634	-		Shewana3_3875	0.11	+0.6
4,654,708	-		Shewana3_3875	0.30	-0.0
4,654,708	-		Shewana3_3875	0.30	-0.8
4,654,921	+		Shewana3_3875	0.83	+0.7
4,654,958	-				+0.1
4,655,356	+		Shewana3_3876	0.17	-0.6
4,655,356	+		Shewana3_3876	0.17	+0.1