Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3869

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,644,645	-		Shewana3_3867	0.76	-0.4
4,644,765	+				-0.1
4,644,773	-				+0.2
4,644,773	-				+0.3
4,644,899	-		Shewana3_3868	0.18	-0.5
4,644,911	-		Shewana3_3868	0.20	-3.3
4,645,045	+		Shewana3_3868	0.38	+0.2
4,645,053	-		Shewana3_3868	0.39	-0.1
4,645,053	-		Shewana3_3868	0.39	+0.8
4,645,063	-		Shewana3_3868	0.40	-0.0
4,645,154	+		Shewana3_3868	0.52	-0.9
4,645,154	+		Shewana3_3868	0.52	+0.1
4,645,164	+		Shewana3_3868	0.53	-0.1
4,645,167	-		Shewana3_3868	0.54	-0.7
4,645,172	-		Shewana3_3868	0.54	+0.4
4,645,179	-		Shewana3_3868	0.55	-0.3
4,645,264	+		Shewana3_3868	0.66	-0.5
4,645,284	-		Shewana3_3868	0.69	-0.3
4,645,315	-		Shewana3_3868	0.73	+0.2
4,645,445	+				-0.0
4,645,496	-				-0.4
4,645,515	-				-0.2
4,645,552	+				+0.2
4,645,559	+				-0.6
4,645,559	+				-0.2
4,645,567	-				+0.7
4,645,567	-				+0.1
4,645,567	-				-0.2
4,645,577	-				-0.2
4,645,577	-				+0.0
4,645,577	-				+0.0
4,645,577	-				+0.5
4,645,577	-				+0.6
4,645,590	+				+0.2
4,645,661	+		Shewana3_3869	0.23	-0.2
4,645,661	+		Shewana3_3869	0.23	-0.2
4,645,669	-		Shewana3_3869	0.24	+0.3
4,645,671	+		Shewana3_3869	0.25	-0.5
4,645,717	+		Shewana3_3869	0.33	-0.7
4,645,758	+		Shewana3_3869	0.40	+0.1
4,645,760	-		Shewana3_3869	0.41	-0.5
4,645,906	+		Shewana3_3869	0.67	+1.8
4,646,010	+		Shewana3_3869	0.86	-1.9
4,646,010	+		Shewana3_3869	0.86	-0.0
4,646,011	+		Shewana3_3869	0.87	-1.6
4,646,011	+		Shewana3_3869	0.87	-0.6
4,646,011	+		Shewana3_3869	0.87	-0.9
4,646,011	+		Shewana3_3869	0.87	-0.6
4,646,011	+		Shewana3_3869	0.87	+1.4
4,646,016	+		Shewana3_3869	0.87	-2.7
4,646,019	-		Shewana3_3869	0.88	-0.1
4,646,019	-		Shewana3_3869	0.88	-1.0
4,646,019	-		Shewana3_3869	0.88	+0.7
4,646,019	-		Shewana3_3869	0.88	+0.1
4,646,021	+		Shewana3_3869	0.88	-0.9
4,646,024	-		Shewana3_3869	0.89	-0.5
4,646,029	-		Shewana3_3869	0.90	-0.3
4,646,041	-				-0.0
4,646,051	-				+1.0
4,646,122	+				-0.3
4,646,129	+				-0.9
4,646,129	-				-0.0
4,646,129	-				+0.2
4,646,333	+				-0.8
4,646,397	+				-0.2
4,646,397	+				+1.8
4,646,405	-				-2.3
4,646,424	-				-1.4
4,646,484	-				-0.1
4,646,484	-				-2.8
4,646,502	+				-1.3
4,646,508	-				-0.6
4,646,515	-				-0.6
4,646,515	-				-0.5
4,646,515	-				-1.3
4,646,516	-				-1.1
4,646,547	+				-0.2
4,646,548	-				-0.8
4,646,590	+		Shewana3_3870	0.23	+0.1
4,646,606	+		Shewana3_3870	0.38	+0.2
4,646,611	-		Shewana3_3870	0.43	-0.4
4,646,621	+		Shewana3_3870	0.52	-2.7
4,646,621	+		Shewana3_3870	0.52	-1.6
4,646,621	+		Shewana3_3870	0.52	+0.2
4,646,621	+		Shewana3_3870	0.52	+0.7
4,646,621	+		Shewana3_3870	0.52	-0.8
4,646,621	+		Shewana3_3870	0.52	-2.3
4,646,621	+		Shewana3_3870	0.52	-1.2
4,646,621	+		Shewana3_3870	0.52	+1.1
4,646,621	+		Shewana3_3870	0.52	-1.1
4,646,621	+		Shewana3_3870	0.52	-1.2
4,646,621	+		Shewana3_3870	0.52	-0.7
4,646,621	+		Shewana3_3870	0.52	+0.3
4,646,621	+		Shewana3_3870	0.52	-0.3
4,646,621	+		Shewana3_3870	0.52	+2.0
4,646,629	-		Shewana3_3870	0.60	-1.3
4,646,629	-		Shewana3_3870	0.60	-0.2
4,646,629	-		Shewana3_3870	0.60	-0.4
4,646,629	-		Shewana3_3870	0.60	-0.2
4,646,629	-		Shewana3_3870	0.60	-0.4
4,646,629	-		Shewana3_3870	0.60	-0.5
4,646,629	-		Shewana3_3870	0.60	+0.8
4,646,629	-		Shewana3_3870	0.60	-2.6
4,646,629	-		Shewana3_3870	0.60	-1.5
4,646,664	+				-0.9
4,646,672	-				-0.5
4,646,682	-				-0.7
4,646,683	-				-1.3
4,646,689	-				-1.1
4,646,700	+				-0.3
4,646,700	+				-0.6
4,646,700	+				-0.5
4,646,700	+				-0.3
4,646,700	+				-0.0
4,646,700	+				+0.1
4,646,700	+				-0.5
4,646,700	+				-1.4
4,646,700	+				-2.0
4,646,700	+				-1.0
4,646,700	+				+1.6
4,646,701	+				-1.4
4,646,708	-				-0.5
4,646,708	-				-1.9
4,646,708	-				-1.4
4,646,708	-				+0.4
4,646,708	-				-2.1
4,646,708	-				-1.4
4,646,708	-				-1.4
4,646,708	-				-2.4
4,646,708	-				-2.1
4,646,708	-				-1.4
4,646,708	-				-1.2
4,646,708	-				-0.8
4,646,711	+				+2.3
4,646,711	+				-0.7
4,646,718	-				-0.2
4,646,718	-				-0.8
4,646,719	-				+0.8
4,646,719	-				-2.3
4,646,719	-				+0.2
4,646,727	+				+1.2
4,646,735	-				-1.4
4,646,737	-				-1.8
4,646,791	+				+0.3
4,646,791	+				+0.5
4,646,796	+				-0.2
4,646,801	+				-0.1
4,646,801	+				-0.2
4,646,804	-				+2.0
4,646,804	-				-1.4
4,646,807	-				-1.3
4,646,809	-				-1.0
4,646,809	-				+0.2
4,646,809	-				-1.8
4,646,809	-				+0.1
4,646,848	+				+0.3
4,646,859	+				+0.8
4,646,859	+				-0.7
4,646,859	+				-0.0
4,646,859	+				-0.9
4,646,859	+				-0.5
4,646,859	+				-0.4
4,646,859	+				+0.5
4,646,859	+				-0.0
4,646,859	+				-0.2
4,646,859	+				+0.8
4,646,859	+				-0.2
4,646,859	+				-2.9
4,646,859	+				+0.6
4,646,859	+				+0.7
4,646,859	+				-0.4
4,646,859	+				-0.6
4,646,859	+				-1.6
4,646,859	+				-0.2
4,646,859	+				-0.2
4,646,859	+				-0.5
4,646,859	+				-0.5
4,646,859	+				+0.5
4,646,859	+				-1.0
4,646,859	+				+0.3
4,646,859	+				-0.0
4,646,859	+				-0.0
4,646,859	+				-0.0
4,646,859	+				-0.3
4,646,859	+				-0.6
4,646,859	+				+0.3
4,646,859	+				+0.0
4,646,859	+				+0.0
4,646,859	+				+0.2
4,646,859	+				+0.6
4,646,859	+				-0.4
4,646,859	+				-0.2
4,646,860	+				+0.3
4,646,860	+				-0.1
4,646,860	+				-0.5
4,646,860	+				+0.1
4,646,860	+				-0.1
4,646,860	+				-0.3
4,646,860	+				-0.1
4,646,860	+				+0.0
4,646,860	+				-0.3
4,646,860	+				-0.2
4,646,860	+				-0.2
4,646,860	+				+0.1
4,646,860	+				-0.1
4,646,867	-				-2.5
4,646,867	-				-0.1
4,646,867	-				-0.0
4,646,867	-				-1.7
4,646,867	-				+0.3
4,646,867	-				-0.1
4,646,867	-				-1.0
4,646,867	-				-1.6
4,646,867	-				-1.0
4,646,867	-				-1.0
4,646,867	-				-0.9
4,646,867	-				-0.2
4,646,867	-				-0.1
4,646,867	-				-1.2
4,646,867	-				-0.7
4,646,867	-				-0.3
4,646,867	-				-2.7
4,646,867	-				-0.3
4,646,867	-				-0.5
4,646,867	-				-0.2
4,646,867	-				+0.9
4,646,867	-				-0.8
4,646,867	-				-0.5
4,646,867	-				-1.4
4,646,867	-				+0.7
4,646,867	-				+2.0
4,646,867	-				-0.4
4,646,867	-				-2.2
4,646,867	-				-0.9
4,646,867	-				+1.6
4,646,867	-				-0.4
4,646,867	-				+0.0
4,646,868	-				-1.0
4,646,868	-				-0.8
4,646,868	-				-2.7
4,646,868	-				+0.8
4,646,868	-				-0.8
4,646,868	-				+0.2
4,646,868	-				-2.4
4,646,868	-				+2.4
4,646,868	-				-0.3
4,646,868	-				-0.4
4,646,868	-				-1.9
4,646,868	-				-1.7
4,646,868	-				-0.3
4,646,870	+				-1.1
4,646,870	+				-0.1
4,646,870	+				+0.7
4,646,870	+				-0.3
4,646,870	+				+0.0
4,646,870	+				-0.8
4,646,870	+				+0.3
4,646,870	+				-0.1
4,646,870	+				+0.1
4,646,870	+				+1.9
4,646,870	+				+0.7
4,646,870	+				-0.2
4,646,870	+				-0.2
4,646,870	+				+0.4
4,646,870	+				-0.3
4,646,870	+				+0.5
4,646,878	-				-2.1
4,646,878	-				+0.3
4,646,878	-				-0.9
4,646,878	-				-0.6
4,646,878	-				-1.9
4,646,878	-				+0.2
4,646,878	-				-0.1
4,646,878	-				-1.4
4,646,882	+				+0.1
4,646,882	+				+1.1
4,646,885	+				+0.1
4,646,926	+				-0.2
4,646,930	+				-0.2
4,646,930	+				+0.3
4,646,930	+				+0.2
4,646,937	+				-0.2
4,646,938	-				-1.6
4,646,938	-				+0.2
4,646,938	-				-1.8
4,646,938	-				-1.4
4,646,944	-				-2.0
4,646,945	-				-0.8
4,646,955	-				-0.3
4,647,005	-				+0.1
4,647,035	+				-1.2
4,647,037	+				+0.2
4,647,045	-				-1.3