Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3863

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,639,262	+		Shewana3_3862	0.47	+0.1
4,639,262	+		Shewana3_3862	0.47	-0.8
4,639,284	-		Shewana3_3862	0.48	-0.3
4,639,302	+		Shewana3_3862	0.49	-0.9
4,639,302	+		Shewana3_3862	0.49	-0.6
4,639,310	-		Shewana3_3862	0.49	-1.0
4,639,310	-		Shewana3_3862	0.49	-1.7
4,639,339	-		Shewana3_3862	0.51	-1.0
4,639,461	-		Shewana3_3862	0.58	-1.1
4,639,566	+		Shewana3_3862	0.63	-1.0
4,639,566	+		Shewana3_3862	0.63	-0.7
4,639,573	+		Shewana3_3862	0.64	-1.5
4,639,656	-		Shewana3_3862	0.68	+0.8
4,639,658	+		Shewana3_3862	0.68	-1.1
4,639,666	-		Shewana3_3862	0.69	-0.0
4,639,700	+		Shewana3_3862	0.70	+0.1
4,639,798	+		Shewana3_3862	0.76	+0.1
4,639,847	+		Shewana3_3862	0.78	-1.1
4,639,979	-		Shewana3_3862	0.85	-2.6
4,639,979	-		Shewana3_3862	0.85	-1.3
4,639,979	-		Shewana3_3862	0.85	-1.0
4,640,091	-				-0.2
4,640,094	+				-0.3
4,640,154	+				-0.4
4,640,155	-				-0.6
4,640,210	+				-0.2
4,640,210	+				+2.0
4,640,328	+		Shewana3_3863	0.13	-0.9
4,640,341	-		Shewana3_3863	0.15	-0.8
4,640,362	-		Shewana3_3863	0.19	-1.3
4,640,421	-		Shewana3_3863	0.28	-0.0
4,640,421	-		Shewana3_3863	0.28	-1.5
4,640,421	-		Shewana3_3863	0.28	+1.3
4,640,421	-		Shewana3_3863	0.28	-3.0
4,640,442	-		Shewana3_3863	0.31	-0.5
4,640,461	-		Shewana3_3863	0.34	+1.1
4,640,513	-		Shewana3_3863	0.43	-0.2
4,640,513	-		Shewana3_3863	0.43	-0.6
4,640,539	+		Shewana3_3863	0.47	-0.4
4,640,539	+		Shewana3_3863	0.47	-0.6
4,640,539	+		Shewana3_3863	0.47	-0.6
4,640,547	-		Shewana3_3863	0.48	-1.3
4,640,660	+		Shewana3_3863	0.66	-0.6
4,640,663	+		Shewana3_3863	0.67	-0.7
4,640,673	+		Shewana3_3863	0.68	-1.0
4,640,673	+		Shewana3_3863	0.68	-0.9
4,640,681	-		Shewana3_3863	0.69	-0.5
4,640,737	-		Shewana3_3863	0.78	+0.1
4,640,821	+				-0.2
4,641,013	+				-1.7
4,641,199	+		Shewana3_3864	0.25	+0.2
4,641,282	-		Shewana3_3864	0.37	-0.3
4,641,447	-		Shewana3_3864	0.63	-0.3
4,641,533	+		Shewana3_3864	0.76	+0.3
4,641,653	-				-0.3
4,641,655	+				+0.1
4,641,755	-				-0.1