Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3794

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,558,324	-		Shewana3_3793	0.27	+0.2
4,558,455	+		Shewana3_3793	0.38	-0.3
4,558,501	+		Shewana3_3793	0.41	-0.2
4,558,509	-		Shewana3_3793	0.42	+0.1
4,558,549	+		Shewana3_3793	0.45	-0.3
4,558,554	+		Shewana3_3793	0.45	-0.7
4,558,598	+		Shewana3_3793	0.49	+1.8
4,558,651	-		Shewana3_3793	0.53	-0.5
4,558,839	+		Shewana3_3793	0.68	-0.5
4,558,847	-		Shewana3_3793	0.68	-0.1
4,558,898	+		Shewana3_3793	0.72	-0.2
4,558,906	-		Shewana3_3793	0.73	+0.6
4,558,906	-		Shewana3_3793	0.73	+0.6
4,558,906	-		Shewana3_3793	0.73	-0.4
4,558,921	+		Shewana3_3793	0.74	-0.8
4,558,923	+		Shewana3_3793	0.74	+2.8
4,558,931	-		Shewana3_3793	0.75	+0.2
4,558,931	-		Shewana3_3793	0.75	+0.3
4,559,214	-				+0.3
4,559,253	-				+0.1
4,559,268	-				-0.0
4,559,478	-		Shewana3_3794	0.14	+0.5
4,559,554	+		Shewana3_3794	0.18	-1.0
4,559,562	-		Shewana3_3794	0.18	+0.6
4,559,635	+		Shewana3_3794	0.23	+0.4
4,559,995	+		Shewana3_3794	0.44	-0.4
4,560,010	-		Shewana3_3794	0.44	+0.4
4,560,128	+		Shewana3_3794	0.51	-0.2
4,560,149	+		Shewana3_3794	0.53	-0.1
4,560,159	-		Shewana3_3794	0.53	+0.6
4,560,166	+		Shewana3_3794	0.54	-0.5
4,560,174	-		Shewana3_3794	0.54	+2.6
4,560,174	-		Shewana3_3794	0.54	+0.1
4,560,367	+		Shewana3_3794	0.65	-1.2
4,560,377	+		Shewana3_3794	0.66	-1.1
4,560,414	+		Shewana3_3794	0.68	-0.5
4,560,422	-		Shewana3_3794	0.68	+0.4
4,560,422	-		Shewana3_3794	0.68	+0.1
4,560,480	+		Shewana3_3794	0.72	-0.3
4,560,594	+		Shewana3_3794	0.78	+1.9
4,560,599	+		Shewana3_3794	0.79	+0.3
4,560,691	+		Shewana3_3794	0.84	-0.1
4,560,792	+		Shewana3_3794	0.90	+0.4
4,560,933	+				+1.4
4,560,963	-				-0.2
4,561,003	+				+0.5
4,561,116	-				-0.5
4,561,188	+		Shewana3_3795	0.10	-3.3
4,561,245	+		Shewana3_3795	0.19	-0.1
4,561,248	-		Shewana3_3795	0.19	+2.3
4,561,303	+		Shewana3_3795	0.27	-1.2
4,561,303	+		Shewana3_3795	0.27	+0.2
4,561,335	+		Shewana3_3795	0.32	-0.4
4,561,341	-		Shewana3_3795	0.33	-1.9
4,561,449	-		Shewana3_3795	0.49	-0.1
4,561,534	+		Shewana3_3795	0.62	-0.2
4,561,558	+		Shewana3_3795	0.65	-0.4
4,561,593	-		Shewana3_3795	0.70	-1.8
4,561,607	+		Shewana3_3795	0.72	-0.9
4,561,641	+		Shewana3_3795	0.77	+0.5
4,561,641	+		Shewana3_3795	0.77	+2.2
4,561,641	+		Shewana3_3795	0.77	+0.0
4,561,649	-		Shewana3_3795	0.79	-0.2
4,561,649	-		Shewana3_3795	0.79	+1.1
4,561,649	-		Shewana3_3795	0.79	-1.0
4,561,664	+		Shewana3_3795	0.81	-0.1
4,561,740	+				-0.0
4,561,815	-				-0.9
4,561,854	-				-1.3