Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3701

Experiment: Rifampicin 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.001 mg/ml
4,441,723	+	hslU	Shewana3_3700	0.50	+0.1
4,441,731	-	hslU	Shewana3_3700	0.50	+0.3
4,441,885	+	hslU	Shewana3_3700	0.62	-0.1
4,441,904	+	hslU	Shewana3_3700	0.63	-1.2
4,441,922	-	hslU	Shewana3_3700	0.64	+1.9
4,442,281	+				+0.5
4,442,388	-				+0.3
4,442,472	+				-0.5
4,442,474	-				-0.5
4,442,480	+				+0.3
4,442,480	-				-0.5
4,442,480	-				+0.1
4,442,635	+		Shewana3_3701	0.22	+2.3
4,442,654	-		Shewana3_3701	0.27	-0.2
4,442,708	-		Shewana3_3701	0.41	+0.2
4,442,743	+		Shewana3_3701	0.50	+0.2
4,442,797	-		Shewana3_3701	0.64	+0.2
4,443,147	+				+0.1
4,443,346	+				-0.7
4,443,360	-				-0.2
4,443,497	+		Shewana3_3702	0.31	-0.6
4,443,561	-		Shewana3_3702	0.42	-0.5
4,443,639	+		Shewana3_3702	0.55	+0.5
4,443,647	-		Shewana3_3702	0.57	-0.1
4,443,647	-		Shewana3_3702	0.57	-0.3
4,443,698	+		Shewana3_3702	0.65	-1.4
4,443,886	-				+0.9